NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGTGATTCCATAGGTTCTATTTTGTCTAGCCTATGAATCAACAT
CCCTTGACTCTAGCCCCTTGATTATCACAAGAAGACAGCAAGCATTTTTT
TCTTCTTCTTATATTGCAAAGGAATTCAGAGATCTGCCTGCCTTTATTAA
GTACAGACAATAAGCTAGCTGGGTGGGACCCCCACCCTAAAATTACCATT
CCTACCACACCTGGGCCAAGAACTAAACTTCTGCTGGACCTGGAAGACCT
TAAACTCAGGAATTTGCCTGCCTTTATGAGCAAAAACAAAACAAAAGTTG
CCCTTCAATCACCACTCCCTCAAGCTATCTTCTTTCTTAGTAACATTCTG
ACAATTTGACTCGCAGTGCAGCTGCCTCTGTTCTTTTAAATCTGTGAAGC
TTCTTACACAATTCACAAGCATCCTCATATTTTTGAAGAATTGGTAAAGT
ATATATGTTTGAACTTATATTTTTAGTGTTTATTCCCACAACATTAAGGG
CTGTCCTGAAGGTCTCAGCATTTGCCATTTTGCTAAGATATAGACATACC
CTTGCCTCCTGGACTCCTGTTGCTTCTAATTATGATGGAATCTTTAAAAT
TAGTTTGAAATTAGTTTGGNCAGACTCACAGGGGTGTAGTTTCTCTTATT
TCAANATAAACGGATTCCTTGGAAATGGCGAAAGTGCTGACTTAACCCTT
ATTGCTTTTTCTTGACGA

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTTATAGATTAAGATCAAAATCTGT
GCCATCACTGAAAGGAAACTGGCATGAGTTCAAGTCAGTTCCCTACTTAG
AATTCCTACCAGGTCTTTAAACTCTTTCTCTCCCCATGTATAGACATGCT
TAAAATATGTCAGAGTATGAAATTCCTATCGCTTCTTTAGAATTATACAT
TTAGACAACATTTTGATCTTTCAACAAGTCAGTTTCTGGTACAATATTTA
CTTAATTCTTGAATAACATATAAACGTGCTCTTTCTGCCTCGCTTTGAGA
GTTTTTCCACAAAGACAATGTGCAAGTTTCTGTTAAGTTTTACATATCTC
CTTTGCTGAACATTTTAAAAAGGAAGTTACATATTTGTTATTTGTCTAAT
ATAATTAAATACCTTGGCAAAAGCTAAAAATAATATTACTCAAAATATTT
CAAAATACATAAACACTACAAAGCTGAAATTACAAAAAATACATTGAGAA
ACTTTAAATTATCCTGTAATCTTAGTGTTTGTCCTAATATTCAATAGTTT
TTCTCCATTTTAGAATTGATATTTCTATATGTATATTCACATTTCTCAAC
TTTACTTTGAAATCCCATAAAATTCGGAAGCCCAAAAATTGCCTCTCCGG
ACCCGGGAAGCAGGATTAATCACCGTGGTTTCTGCCTAATTGTTGGGAAA
CGGAAAAATGAACCGGGGG

Query= MSMg01no378_h13.g1 MSMg01no378_h13.g1 CHROMAT_FILE:
MSMg01no378_h13.g1 PHD_FILE: MSMg01no378_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:58 2005
         (494 letters)



>mm_chr12_96106128_96107019
          Length = 892

 Score =  816 bits (422), Expect = 0.0
 Identities = 472/494 (95%), Gaps = 12/494 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttatagattaagatcaaaatctgtgccatcactgaaaggaaactggcatgagttcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 ctttatagattaagatcaaaatctgtgccatcactgaaaggaaactggcataagttcaag 562

                                                                       
Query: 61  tcagttccctacttagaattcctaccaggtctttaaactctttctctccccatgtataga 120
           ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 561 tcagttccctacttagaattcctaccaggtctttagactcattctctccccatgtataga 502

                                                                       
Query: 121 catgcttaaaatatgtcagagtatgaaattcctatcgcttctttagaattatacatttag 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgcttaaaatatgtcagagtatgaaattcctatcgcttctttagaattatacatttag 442

                                                                       
Query: 181 acaacattttgatctttcaacaagtcagtttctggtacaatatttacttaattcttgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaacattttgatctttcaacaagtcagtttctggtacaatatttacttaattcttgaat 382

                                                                       
Query: 241 aacatataaacgtgctctttctgcctcgctttgagagtttttccacaaagacaatgtgca 300
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 381 aacatataaacgtgctctttctgcctccctttgagagtttttccacaaagacaacgtgca 322

                                                                       
Query: 301 agtttctgttaagttttacatatctcctttgctgaacattttaaaaaggaagttacatat 360
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttctgttaagttttacctatctcctttgctgaacattttaaaaaggaagttacatat 262

                                                                       
Query: 361 ttgttatttgtctaatataattaaataccttggcaaaagctaaaaataatattactcaaa 420
           || ||||| ||||||||||||||||||||||||||||||||||||| |||||  | |   
Sbjct: 261 tttttatt-gtctaatataattaaataccttggcaaaagctaaaaa-aatat--cgc--- 209

                                                                       
Query: 421 atatttcaaaatacataaacactacaaagctgaaattacaaaaaatacattgagaaactt 480
                |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 208 -----tcaaaatacataaacactacaaagttgaaattacaaaaaatacattgagaaactt 154

                         
Query: 481 taaattatcctgta 494
           ||||||||||||||
Sbjct: 153 taaattatcctgta 140


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 892
Length adjustment: 10
Effective length of query: 484
Effective length of database: 882
Effective search space:   426888
Effective search space used:   426888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)