NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCAGCACTGGCATCTCTAATGGCCCAGAAACACTCAAAGAAAA
TTTCAACATCCCTAGTCATTAGAAAAATGCAAATTAAAATGACTCTGATA
TGCCATCTTACCTTTGTTAGAATGGTTATGATCAAAAATTCAAGTGGCAG
TCCACATCAAGAGGATGTGAAGCAAGGGGAGTATTCCTCCATTGCTGGTG
GTAGTGCAAACTTGTACAATCACTTTGGAAATAAATTTGGCAGTTTCTCA
GAAAATTGGGAAATGATCTACCTTAATATCTAGGTATACCACTCCTGGGC
ATATACCCCAAAATGCTCTAACATACCAAAAGAACACTTGCTCAACTATG
CTCATAGCAGCTTCATTAGCCAGAACCTGAAAATAACCTACATGTCTCTC
AACCACATAATGGATAAAGAAAATGTTACATATTGACACATTGAACTATC
AACTATTAAAAATAATAACATCATGAAATTTGCAGGCAAATGAGTGGAAC
TAGAAAACATCATGCTGAGTGATGTAATGCAGACCCAGAGAGACATATAT
GGAGCATAGTTAGTTATGAGTGGATATTAGTCATAAAGTACAGTATAACC
ATGATACAGTCCACTGACCCCCAGAAGCTAAGTAACAAGGGAGAATCTCA
GGAGTGACTTTTGAATAGGAGGGGAGAAGAAAAATAAATTAGATATCCAA
GGGGAATACAATCCCTTTCTCCACAAAA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCCAGAAGTAGATGCCAAGTG
CAGTTAGACATGGAATATATTTATTGGGAGCATGTTGTGAAAGATAAAGG
AAAATGAGTGGATGCAGTCAAGAAGAGTGTTGATACTGTGATAAAAAATA
AGAACAGAGCACTAGCTAAAAGATTAATGCATGTCAATGGTGCTGCTTTG
TGAAAGTTTTCCATTAGAGGAATCCTTCTTCAGGCAGTAATGGACATTCA
CTAGTAAAATACTGTCCTGTGAACTTCTGGTAGCTGCTGCCCCAAACTGA
GGCAACAGTATTCTGTGGGCAGCAACTGGAGGCTGGCAGTTAGCTCTGCT
ACCCACAGAAGGTTCTTATAAAAGAGATGTAAGTACCATGTATTGTACAT
GTCTATGGTTGCTCTTGGTATTTCAAGGCAGTGCTAAAAGACATGCCTGT
GTATTTGAAGGAAAGAGGATTTGCTTAAGGACAGAGATCCACCCCCATGG
TATTAAAATCATTTTGAGTCACCGCTGTTGCTGGTTCCACCTGACAGCTC
CACTAGGGATACAATCATGCTTAACCTATCTGAGTCTGAGTAAAACATAT
GATGAGATGTCAACCTCTGTGAATTGCCCATTTACTAAAGAATTTGATTT
GTAGTTGGCAATAAAAATACCTCTTACTATTTTAACAGCTTTTTTCCTGG
TCCTTCCTACCATAAN

Query= MSMg01no378_o20.g1 MSMg01no378_o20.g1 CHROMAT_FILE:
MSMg01no378_o20.g1 PHD_FILE: MSMg01no378_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:32 2005
         (492 letters)



>mm_chr12_46452805_46453695
          Length = 891

 Score =  920 bits (476), Expect = 0.0
 Identities = 488/492 (99%), Gaps = 1/492 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcccagaagtagatgccaagtgcagttagacatggaatatatttattgggagcatgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttcccagaagtagatgccaagtgcagttagacatggaatatatttattgggagcatgttg 632

                                                                       
Query: 61  tgaaagataaaggaaaatgagtggatgcagtcaagaagagtgttgatactgtgataaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 631 tgaaagataaaggaaaatgagtggatgcagtcaagaagagtgttgatactgtgat-aaaa 573

                                                                       
Query: 121 ataagaacagagcactagctaaaagattaatgcatgtcaatggtgctgctttgtgaaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ataagaacagagcactagctaaaagattaatgcatgtcaatggtgctgctttgtgaaagt 513

                                                                       
Query: 181 tttccattagaggaatccttcttcaggcagtaatggacattcactagtaaaatactgtcc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 tttccattagaggaatccttcttcaggcagtaatggacattcactagtaaaatactgttc 453

                                                                       
Query: 241 tgtgaacttctggtagctgctgccccaaactgaggcaacagtattctgtgggcagcaact 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtgaacttctgggagctgctgccccaaactgaggcaacagtattctgtgggcagcaact 393

                                                                       
Query: 301 ggaggctggcagttagctctgctacccacagaaggttcttataaaagagatgtaagtacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggaggctggcagttagctctgctacccacagaaggttcttataaaagagatgtaagtacc 333

                                                                       
Query: 361 atgtattgtacatgtctatggttgctcttggtatttcaaggcagtgctaaaagacatgcc 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atgtatggtacatgtctatggttgctcttggtatttcaaggcagtgctaaaagacatgcc 273

                                                                       
Query: 421 tgtgtatttgaaggaaagaggatttgcttaaggacagagatccacccccatggtattaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgtgtatttgaaggaaagaggatttgcttaaggacagagatccacccccatggtattaaa 213

                       
Query: 481 atcattttgagt 492
           ||||||||||||
Sbjct: 212 atcattttgagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space:   424642
Effective search space used:   424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)