Query= MSMg01no379_b14.b1 MSMg01no379_b14.b1 CHROMAT_FILE:
MSMg01no379_b14.b1 PHD_FILE: MSMg01no379_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:46 2005
(517 letters)
>mm_chr12_33926605_33927521
Length = 917
Score = 978 bits (506), Expect = 0.0
Identities = 512/514 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaacacattcacacttcttttctttttcctgcatcagataatcacccaagacaa 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggaattcaacacaatcacacttcttttctttttcctgcatcagataatcacccaagacaa 658
Query: 64 tcctctgatccctatgggtggctccctacctcagtaacaacatctctaatagcacccagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tcctctgatccctatgggtggctccctacctcagtaacaacatctctaatagcacccagt 598
Query: 124 gtaaagctgccacctttaaccggctttccacttaagatcaacacaagtactttgtaaggt 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtaaagctgccacctttaaccagctttccacttaagatcaacacaagtactttgtaaggt 538
Query: 184 tcaccaggaacatacatgtaccacaccactgtcacctggatagagaccaacttggtgttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcaccaggaacatacatgtaccacaccactgtcacctggatagagaccaacttggtgttc 478
Query: 244 gtggcagcaaagtgacagttggggccaggagaccttctcaccgatcagggaatgccccca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtggcagcaaagtgacagttggggccaggagaccttctcaccgatcagggaatgccccca 418
Query: 304 ttaaacctgtgcagcatacgcctgctggggccaattcaatattcataagtgggaagtgga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttaaacctgtgcagcatacgcctgctggggccaattcaatattcataagtgggaagtgga 358
Query: 364 gatcacattttctgtttcgccaggagcgatagctatttatcacggcgaatgactgaaaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gatcacattttctgtttcgccaggagcgatagctatttatcacggcgaatgactgaaaca 298
Query: 424 gttgtacatacagtgctttccttgctgctgtaaattacagtatacagaagattaaactta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gttgtacatacagtgctttccttgctgctgtaaattacagtatacagaagattaaactta 238
Query: 484 agcctaatgctacccttgagcctcaacagctgag 517
||||||||||||||||||||||||||||||||||
Sbjct: 237 agcctaatgctacccttgagcctcaacagctgag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_b14.g1 MSMg01no379_b14.g1 CHROMAT_FILE:
MSMg01no379_b14.g1 PHD_FILE: MSMg01no379_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:46 2005
(378 letters)
>mm_chr12_33754046_33754818
Length = 773
Score = 669 bits (346), Expect = 0.0
Identities = 368/378 (97%), Gaps = 5/378 (1%)
Strand = Plus / Plus
Query: 1 acgatgttaaatatgaggggcaataagaacatactttataaccctttatttattgcaaag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 acgatgttaaatatgaggggcaataagaacacactttataaccctttatttattgcaaag 260
Query: 61 agctcttaggttaagaggtttctttatctatggctaagatgagaggtgatctatccccaa 120
|||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 261 agctcttaggttaagaggtttccttatctatggcta-----agaggtgatctttccccaa 315
Query: 121 ggccttagactgtgagcccaataggcagtgggggatttaaaactagaattatggggccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggccttagactgtgagcccaataggcagtgggggatttaaaactagaattatggggccca 375
Query: 181 aagtctagggtcaaagatgcacagccaaggtctctaaccaacaatgtggtgtgtgatcaa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 376 aagtctagggtcaaagatgcacagccaaggtctctagccaacaatgtggtgtgtgatcaa 435
Query: 241 cgtggagttcctaggaccaaaaaagagtgacccaaaaatagagtaaaggtttcatcttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cgtggagttcctaggaccaaaaaagagtgacccaaaaatagagtaaaggtttcatcttgg 495
Query: 301 gccaatatagagtctttaaaccatgtttaagaagtatttactttctgtttgttatataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gccaatatagagtctttaaaccatgtttaagaagtatttactttctgtttgttatataat 555
Query: 361 gatatctttctagttgta 378
||||| ||||||||||||
Sbjct: 556 gatatatttctagttgta 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 773
Length adjustment: 9
Effective length of query: 369
Effective length of database: 764
Effective search space: 281916
Effective search space used: 281916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
