XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CTCAAGCAGAGTAGAGTCAGTCAGTTGGGAGTCAGTACAATGAGTGCAGT
ACAGTGGAGTTGAGTTTGTTTGTGAGCTGATGCAATTCAGAGTAGGTCAC
CAGTAGCAGTTGAAGCCAGAAAGTAAGAAGAAGCCAGAAGACTAGAACAA
ATTGCCAGAGTTAGTTTGAGGCCAAGCAGAACAATTTAGTGAGAAGCTGA
GAGAAGCCAGCTGAATAGTTAGCTTGGAGAGGCGTTTGAGCAGAAGAGCT
AGCTGAACCAGTCGGGCAGAGTTTAGAAAGTACTAGAAAGGGTGAATTTA
TTCAGCAGTAAGTCTCTAGGACAATTACATCAGGAAAATAAAATATACTT
TTACAGCTATGTATAGCCCTATTGTTGGAATGAATGACCCCTTTAGGCTC
ATATATTTGAATTCTTTGTCCCAGTTGGTGAAACTCTTTTTTTATTAGGA
TTAGAAGGTGTGGCCCTATAGGAAGAAGTGTGTCACTATGTGTAGGCTTT
GAGATTTTAAAAAGACTTGTTGCTAGTCACAATGTACTCTGACTGCCTCT
TGCTTGTGGATCAACATGTGAGCTCTCAGCTGTGCCTATAACCATTTGCT
CTGCCCTAATGGAGCTAAGCCTCTGAAACTGAAAGCCAGATTAACCACCT
TCTTTTATTGAATTGCTTTGTCCCCGGGGTTCCCCTAGCAATAACAAGGG
GACCCAAACCAGGTAACCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATGGGTTATTAATTTAAAGTGCTATAAATACA
GATATAAAATAATCTTTCAGTATATTACTCAGGTGGGCAGGAAGATTGTT
CTTAGATTCTTAGGACTAAGGTTTTCCATAAAATTCTACATAAGTATTAT
GTACCAACATAGCCATGCAAATTATCACTATAGAAACACCTATGTACCTA
TGAATAAATGAAGTACTTGTTGCAAATCTGCAGAGGTGACCACAACATAT
AAAAGAATTCAAAATTTCTGTTTAGAAAAAAAAAACACTTTATGACCATT
TTTTTTTCTTTTGTGCTTCTACCTTGAACAGAGTTCTCCGCACAGCCAGT
GGAAGCTTGCATTGCACAGTACTGTTCCTTATCTGGTGGCTCTGAGCTCC
ACCCACTGTCCTGTAAGTCAGACGCCATCCGCAAAGTACTCATTTCTGTT
CCCATGTAACAGAGCGTACACCAAGCAAGAGCTGCTTAGGTCTGACTCAT
TTTTAACTGTTTAATATTTTATTTGCTGCCATGGTGATTAACCAGCCTCT
TTCTCCACACTCACAAGCTAGGATGATGTCCACCATGGAGCCATCCATGC
CCCTGTCTTTTACACTTTTATCTAAAGAAAGAGGGCTCATTGATTTGCCC
CTGGGGGCCCTGAACTCTTGGAAATATAAGAAGGGGGGGGTTTGGTGGCC
TTTCTGGCCCAAAA

Query= MSMg01no379_b19.g1 MSMg01no379_b19.g1 CHROMAT_FILE:
MSMg01no379_b19.g1 PHD_FILE: MSMg01no379_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:47 2005
         (511 letters)



>mm_chr12_39233585_39234497
          Length = 913

 Score =  909 bits (470), Expect = 0.0
 Identities = 502/514 (97%), Gaps = 4/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggttattaatttaaagtgctataaatacagatataaaataatctttcagtatattac 60
           ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 713 atgggttattaatttaaagtgttacaaatacagatataaaataatctttcagtatattac 654

                                                                       
Query: 61  tcaggtgggcaggaagattgttcttagattcttaggactaaggttttccataaaattcta 120
           | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 653 taagatgggcaggaagattgctcttagattcttaggactaaggttttccataaaattcta 594

                                                                       
Query: 121 cataagtattatgtaccaacatagccatgcaaattatcactatagaaacacctatgtacc 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cataagtactatgtaccaacatagccatgcaaattatcactatagaaacacctatgtacc 534

                                                                       
Query: 181 tatgaataaatgaagtacttgttgcaaatctgcagaggtgaccacaacatataaaagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tatgaataaatgaagtacttgttgcaaatctgcagaggtgaccacaacatataaaagaat 474

                                                                       
Query: 241 tcaaaatttctgtttag---aaaaaaaaaacactttatgaccatttttttttcttttgtg 297
           |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 473 tcaaaatttctgtttagaaaaaaaaaaaaacactttatgacca-ttttttttcttttgtg 415

                                                                       
Query: 298 cttctaccttgaacagagttctccgcacagccagtggaagcttgcattgcacagtactgt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cttctaccttgaacagagttctccgcacagccagtggaagcttgcattgcacagtactgt 355

                                                                       
Query: 358 tccttatctggtggctctgagctccacccactgtcctgtaagtcagacgccatccgcaaa 417
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcattatctggtggctctgagctccacccactgtcctgtaagtcagacgccatccgcaaa 295

                                                                       
Query: 418 gtactcatttctgttcccatgtaacagagcgtacaccaagcaagagctgcttaggtctga 477
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 294 gtactcatttctgttcccatgtaacagagcttacaccaagcaagagctgcttaggtctga 235

                                             
Query: 478 ctcatttttaactgtttaatattttatttgctgc 511
           ||||||||||||||||||||||||||||||||||
Sbjct: 234 ctcatttttaactgtttaatattttatttgctgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 913
Length adjustment: 10
Effective length of query: 501
Effective length of database: 903
Effective search space:   452403
Effective search space used:   452403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)