ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTAGGGTTGCCTTAGAGGTTTTTCCTGTGAACAGACACCAAGACCAAA
GCAACTCATATAAAGGAAAACATTTAACTGGGGCTGGCTAACAGGTTCAG
AGGTTCCCCTCATTATCATCATGGTGGTGCCCAGGCACACAGGGTTTCAG
AGAAAGAGCTGAGAGTTCTACATCTTTATCCACAGGCAGCAGAAGGTGAC
TGTGTGTCACACTGGGTGTAGCTTGAACATATATAAGACCTCTAAGCCTG
TCTCTACTATGACACAATTCCTCCAACAAGGCTATACCTACTCTAAAAGG
CCACACCCCTTAATAGTGTCACTCCTTATGGGCCAAGCATTCAAACACAT
GAGTCTTTGGTAGACATCCCTATTCAAACTACTGCAAGGGCAGCCAGAGT
AACATAGTGAGACCTTGTTTTAAAAACAAAAGCAAACACATTTTAAAAAA
TCCTTAAAAATAAAAAACAGAAAATCAAATCAAAACAAAACCAATACTGA
CCCCACCAAAAACAAACAAACAAGAAAACATTTGAATGGTATTACCTTGG
TGTATAGAATTCTAAAATAAAAAATAAAAAATATATGAGCTAGTTTGCTG
ATAGTACTATAACATATGGAATTTAACTGTAGGAAATTTTGTGAAATTCA
GAAAAAAGTGAAGAATATTAGATATGTATAGGATAACTCAG

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAG
CACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCGCACCAGTCAGAATGGCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGT
CTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAA
TACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGAC
ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTG
GAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGT
ACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATG
AAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGT
ACACATTCCCAAAGGAACTCACCCAATATGTACTCCCTGATAAGTGGATA
TAGCCTCAAACCTAAGATATCCAGAATAAAGATACAATTTCCTTACCCCT
GAAATTCCTTAATATGTAGATTGAGGGGGATCCTTTG

Query= MSMg01no379_j05.b1 MSMg01no379_j05.b1 CHROMAT_FILE:
MSMg01no379_j05.b1 PHD_FILE: MSMg01no379_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:22 2005
         (612 letters)



>mm_chr12_58955784_58956796
          Length = 1013

 Score = 1133 bits (586), Expect = 0.0
 Identities = 604/610 (99%), Gaps = 1/610 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctagggttgccttagaggtttttcctgtgaacagacaccaagaccaaagcaact 63
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagggctgtcttagaggtttttcctgtgaacagacaccaagaccaaagcaact 263

                                                                       
Query: 64  catataaaggaaaacatttaactggggctggctaacaggttcagaggttcccctcattat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catataaaggaaaacatttaactggggctggctaacaggttcagaggttcccctcattat 323

                                                                       
Query: 124 catcatggtggtgcccaggcacacagggtttcagagaaagagctgagagttctacatctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catcatggtggtgcccaggcacacagggtttcagagaaagagctgagagttctacatctt 383

                                                                       
Query: 184 tatccacaggcagcagaaggtgactgtgtgtcacactgggtgtagcttgaacatatataa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatccacaggcagcagaaggtgactgtgtgtcacactgggtgtagcttgaacatatataa 443

                                                                       
Query: 244 gacctctaagcctgtctctactatgacacaattcctccaacaaggctatacctactctaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 gacctctaagcctgtctctactatgacacaattcctccaacaaggctatacctactcaaa 503

                                                                       
Query: 304 aaggccacaccccttaatagtgtcactccttatgggccaagcattcaaacacatgagtct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggccacaccccttaatagtgtcactccttatgggccaagcattcaaacacatgagtct 563

                                                                       
Query: 364 ttggtagacatccctattcaaactactgcaagggcagccagagtaacatagtgagacctt 423
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 564 ttggtagacatccctattcaaactactgcaagggcagccagagttacatagtgagacctt 623

                                                                       
Query: 424 gttttaaaaacaaaagcaaacacattttaaaaaatccttaaaaataaaaaa-cagaaaat 482
           ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 624 gttttaaaaacaaaagcaaacacattttaaaaaatccttaaaattaaaaaaacagaaaat 683

                                                                       
Query: 483 caaatcaaaacaaaaccaatactgaccccaccaaaaacaaacaaacaagaaaacatttga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 caaatcaaaacaaaaccaatactgaccccaccaaaaacaaacaaacaagaaaacatttga 743

                                                                       
Query: 543 atggtattaccttggtgtatagaattctaaaataaaaaataaaaaatatatgagctagtt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atggtattaccttggtgtatagaattctaaaataaaaaataaaaaatatatgagctagtt 803

                     
Query: 603 tgctgatagt 612
           ||||||||||
Sbjct: 804 tgctgatagt 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space:   603806
Effective search space used:   603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)