Query= MSMg01no381_h18.b1 MSMg01no381_h18.b1 CHROMAT_FILE:
MSMg01no381_h18.b1 PHD_FILE: MSMg01no381_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:54 2005
(418 letters)
>mm_chr12_41354886_41355703
Length = 818
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Plus
Query: 5 gaattccaagtgaactccatccacatgggtaagttggatccgtttatcaggagctttaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagtgaactccatccacatgggtaagttggatccgtttatcaggagctttaag 264
Query: 65 gcagctagtcatattataccttcagcagggaacagcttagtaaaacatgccttatgctta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcagctagtcatattataccttcagcagggaacagcttagtaaaacatgccttatgctta 324
Query: 125 gctttctcactgtttaatactgtataggatgcaaagtgaggtaatggttcagtccactct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctttctcactgtttaatactgtataggatgcaaagtgaggtaatggttcagtccactct 384
Query: 185 taaactggattttcccacatcaattaacatagtaaagacaatgtccacctctgcccccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaactggattttcccacatcaattaacatagtaaagacaatgtccacctctgcccccat 444
Query: 245 cacccagacatatttacaagctgacctgaccttgatagtcccacctggagactcttatct 304
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 cgcccagacatatttacaagctgacctgaccttgatagtcccacctggatactcttatct 504
Query: 305 caggtgattctgggttgtgtcctgctgacaatgaactgtggcagtgcatgaagttcaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caggtgattctgggttgtgtcctgctgacaatgaactgtggcagtgcatgaagttcaatg 564
Query: 365 aagtgtggcatgggacatggttttaaaataaatacattccttttttttcttttc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagtgtggcatgggacatggttttaaaataaatacattccttttttttcttttc 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_h18.g1 MSMg01no381_h18.g1 CHROMAT_FILE:
MSMg01no381_h18.g1 PHD_FILE: MSMg01no381_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:55 2005
(434 letters)
>mm_chr12_41522381_41523214
Length = 834
Score = 692 bits (358), Expect = 0.0
Identities = 398/434 (91%), Gaps = 35/434 (8%)
Strand = Plus / Minus
Query: 1 aatgtgcaggggacagtgagtgaaacttaagcatattaaagcagaaaattttcacaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aatgtgcaggggacagtgagtgaaacttaagcatattaaagcagaaaattttcacaggtt 410
Query: 61 agaaaataagagttcagtaattgttatgaaaacatacaaagattgtgagggagaggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agaaaataagagttcagtaattgttatgaaaacatacaaagattgtgagggagaggaaga 350
Query: 121 agatgggcagacaggaatagtcaacagagaaatgaagggacttcaatgccgatattgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agatgggcagacaggaatagtcaacagagaaatgaagggacttcaatgccgatattgtgc 290
Query: 181 ttttccaagaaaagcatctagactgagtaagaaactcaagagggaaagacagcagcacgc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 289 ttttccaagaaaagcatctagactgagtaagaaactcaagaggggaagacagcagcacgc 230
Query: 241 agtccctctgtgaggtctgctcactgctaccagcccagcccagcccagcccagcccagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 agtccctctgtgaggtctgctcactgctaccagcccagcccagcccagcccagcccagcc 170
Query: 301 cagcccagcccagcccagcccagcccagcccagcccagcccagcccagcccagcccagtc 360
|||||||||||||||||||||||| |
Sbjct: 169 cagcccagcccagcccagcccagc-----------------------------------c 145
Query: 361 cagcccagcccagcccagcccagcccagcaggagtattctgcaatgttctgagctgaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cagcccagcccagcccagcccagcccagcaggagtattctgcaatgttctgagctgaaga 85
Query: 421 ttttctgggcttca 434
||||||||||||||
Sbjct: 84 ttttctgggcttca 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
