Query= MSMg01no381_i17.b1 MSMg01no381_i17.b1 CHROMAT_FILE:
MSMg01no381_i17.b1 PHD_FILE: MSMg01no381_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:59 2005
(472 letters)
>mm_chr12_77165646_77166517
Length = 872
Score = 822 bits (425), Expect = 0.0
Identities = 458/469 (97%)
Strand = Plus / Plus
Query: 4 ggaattcctcactatccgggaaagaactgaactatttggagtcattagtaagatagtctc 63
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcactatatgggaaagaactgaactgtttggagtcattagtaagatagtctc 263
Query: 64 tgctttgtttttgttttatttggtccatgttgttctcaagggctgagctgttttaaactt 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tgctttgtttttgttttatttggtccatgttgttctcaagggctgaactgttttaaactt 323
Query: 124 atgacccaacactataatacgcttaggttttcttttttattattattaattatcattatt 183
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgacccaatactataatactcttaggttttcttttttattattattaattatcattatt 383
Query: 184 tatttatttttgtatgtgagtacactgtctctgtctttagacacatcagaagagggcatt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatttatttttgtatgtgagtacactgtctctgtctttagacacatcagaagagggcatc 443
Query: 244 agatcccactacatatggttgtgagccaccatgcagttgctgggacttgaactcaggacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agatcccactacatatggttgtgagccaccatgcagttgctgggacttgaactcaggacc 503
Query: 304 tctggaagagcaatcagtgttctaaactgctgtgccatctttccagcctgctcttggttt 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 504 tctggaagagcaatcagtgttctaaaccgctgtgccatctttccagcctgctcttggttt 563
Query: 364 ttcaaatggagtttttatttttgtttcacttgtcagaatactaagctatgtttgttttgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcaaatggagtttttatttttgtttcacttgtcagaatactaagctatgtttgttttgt 623
Query: 424 tttatttctatgcttacttctgacactcctctaatctgttgtatgcacc 472
|| ||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 624 ttcatttctatgcttatttctgacactcctctaatctgttgtgtgcacc 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_i17.g1 MSMg01no381_i17.g1 CHROMAT_FILE:
MSMg01no381_i17.g1 PHD_FILE: MSMg01no381_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:59 2005
(454 letters)
>mm_chr12_77351107_77351959
Length = 853
Score = 632 bits (327), Expect = 0.0
Identities = 383/409 (93%), Gaps = 14/409 (3%)
Strand = Plus / Minus
Query: 1 caggagatgggtaggggaggtggccccatgggtaaaaacacatgtcatgcaagcccacca 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 395 caggagatgggtaggggaggtggccccatgggtaaaaacacatgccatgcaagcccgcca 336
Query: 61 acctgagttccaacccagaccaaagtgaaaaagcagagtgcagtgacccggagttcttcc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 335 acctgagttccaacccagaccaaagtg-aaaagcagagtgcagtgacccggagttcttcc 277
Query: 121 tgtgagtcggagggagaaacaagagaggcacgtagaagctggacaccccgaaaacaatgg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgtgagtcagagggagaaacaagagaggcacgtagaagctggacaccccgaaaacaatgg 217
Query: 181 aagactctgcctcaaaacagggtggaaagagagaactgtctcctgagagttatcctttga 240
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 216 aagactctgcctcaaaacagggtggaaagagagaactgacttctgagagttatcctttga 157
Query: 241 cctccacacgattgtttggggtgcacacacacacacacacacacacacacacacaaagaa 300
||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 156 cctccacacgaaggtttggggtg----------cacacacacacacacacacacaaagaa 107
Query: 301 tgtaatgtcagtccagctgctgctcctcaggctacaataccacacagctgctctacctct 360
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 106 tgtaatgtcagtcca---gctgctcctcaggatacaataccacacagctgctctacctct 50
Query: 361 gtcccagtcacccactggcgcactgctgagacactgtctatgcgtctct 409
||| ||| |||||||||| |||||||||||||||||||||| |||||||
Sbjct: 49 gtctcagccacccactggtgcactgctgagacactgtctattcgtctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 853
Length adjustment: 10
Effective length of query: 444
Effective length of database: 843
Effective search space: 374292
Effective search space used: 374292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
