XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XTGTAACTAAATGCTGTAGGATTGAATCTCAGCTTCCCTCGCTATCTGTG
TGACCTTTTGTGATTTAGCTGACCTCTCTGTGCCTGGGTTCCTTCACTTG
GAAAATGATGATTATAACAACACTCTCTTAGGGATTATAAGTTTTGTGTT
GTGGAATGTGGAAATGTTCANNTCTCCGAACTNNNTTCATCNCAATTCTT
CCATCATCTGAGAAGAAATCAAGAACAGACTATTTCCTTGATTCTGTTTT
CTTTGAAATAACAACACGGGCTGTAAGAATCTTATGTTNGGTGTGTAGAA
ACCAGAACCAGGCCCTTTCCATTAAGAGAAAAGCCAACTTGGGAACCCAG
TTCCTTGGCAAGGGGGGGAGAAAAAAAAAACCTTGGGGNCTCCCCAGAAG
GGCTCCTGGGGCCCCCCCTTAAACCTCTGGGAAATAAAACACCCCTTTTT
TTATAACACCCGGGGGGGGGGGGCCCCCCCNNNNNNNNNNNNATAACATA
NNNNATTGCTACCAGCTTTATNNNNNNNTTTGATAATTCCCAAGGGGGGG
GGGGAATACTTTCCAAAAAAAAAACCCCCCCNNNCCTTTTTTGGGGGGGT
TTAGGGGGGCCCCTAAAAAATCCCCCCCTCCCCCCCACNACAAAAGTTGG
GAACTTCTTTTTCTTTTCTTCCTGGGATTTTTG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCAGGTTACTGTCAGTGTTAGCATGCAGAGAGG
CTCTGGAAATTCATTTTTAGATTTACAAGAGAGAGAGGGAAAGACAGAGA
GAGACAGAGACAGACAGAGAGAGGTGGAGAAACAGAGATAGAGGCAAGTA
GAGACAGAGATGGAGACAGAGACAAGGAGACAGGCAGATGGCAGAAAGAG
GGAGGGAGGTAGAAAAAATGTCTCTAATGATCACTCTGATCTACATAAAA
TACAAAATAAGTATCTCAAATGTTTCTAAACTGTACATTAAGTGCTAATG
TGTACCATGGGAAATGGGGTTTATTTAGATCTGGAAAGCTAAAATCACAC
ACAAAGAAATTGATAAATAAGGATAAAGAACTTGTAGTTCAAGTTTTCCA
TAATGAGCTGATGTTATTTTATAATTGGGAAAAAAATACAAAATGTTACC
ATTTACCAAGAAATACTCTTTTCTCTAAGTGGCTTTTAGTTTGAAACCCA
GTTTATTTCTTAACTGAGATTACTACCCGATCAGATGGGAATGTCTACCA
TCCATTTAAAGTGGAAGGATCCCCCTTAACCTGGGGGCCAAAAAAAACTA
CCTAGAGGGGCTTGGATCGACAGAGCCAATATTTATGGAGCCTCCTGGGG
TGGCTTTCCGTTCCCAAAACACCAGGGGGGGCTCCTGGTGGCCCCTTCCT
GGGGGTCCGGGAAGAAAAAGGGCCTCCTCTTGTGCCTGGGN

Query= MSMg01no381_j24.g1 MSMg01no381_j24.g1 CHROMAT_FILE:
MSMg01no381_j24.g1 PHD_FILE: MSMg01no381_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:06 2005
         (421 letters)



>mm_chr12_71753029_71753849
          Length = 821

 Score =  669 bits (346), Expect = 0.0
 Identities = 412/456 (90%), Gaps = 36/456 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggttact-gtcagtgttagcatgcagagaggctctggaaattcatttttagatttaca 59
           ||||||||| || || |||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 167 caggttactggt-agggttagcatgcagagaggctctgcaaattcattttcagatttaca 225

                                                                       
Query: 60  agagagagagggaaagacagagagagacagagacagacagagagaggtggagaaacagag 119
           |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 226 agagagagggggaaagacagagagagacagagacagacagagagaggcggagaaacagag 285

                                                                       
Query: 120 atagaggcaagtagagacagagatggagacagagacaaggagacag-------------- 165
           | |||| || ||||||||||||||||||||||||||||||||||||              
Sbjct: 286 acagagacaggtagagacagagatggagacagagacaaggagacagagagagaaagatgg 345

                                                                       
Query: 166 --------------------gcagatggcagaaagagggagggaggtagaaaaaatgtct 205
                               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agacagagactgagagacaggcagatggcagaaagagggagggaggtagaaaaaatgtct 405

                                                                       
Query: 206 ctaatgatcactctgatctacataaaatacaaaataagtatctcaaatgtttctaaactg 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ctaatgatcactctgatctacataaaatacaaaataagtatctcaaatgtttctaaactg 465

                                                                       
Query: 266 tacattaagtgctaatgtgtaccatgggaaatggggtttatttagatctggaaagctaaa 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tacattaagtgctaatgtgtaccatgggaaatggggtttatttagatctggaaagctaaa 525

                                                                       
Query: 326 atcacacacaaagaaattgataaataaggataaagaacttgtagttcaagttttccataa 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atcacacacaaagaaattgataaataaggataaagaacttgtagttcaagttttccataa 585

                                               
Query: 386 tgagctgatgttattttataattgggaaaaaaatac 421
           ||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgagctgatgttattttataattgggaaaaaaatac 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space:   334544
Effective search space used:   334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)