Query= MSMg01no381_p02.b1 MSMg01no381_p02.b1 CHROMAT_FILE:
MSMg01no381_p02.b1 PHD_FILE: MSMg01no381_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:30 2005
(382 letters)
>mm_chr12_13935731_13936513
Length = 783
Score = 596 bits (308), Expect = e-174
Identities = 365/384 (95%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 1 gcaactcactgctaaaatatcctcaaaacctgtgagcacagaaatttatgtttcacacaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 583 gcaactcactgctaaaatatcctcaaagcctgtgagcacagaaatttatgtttcacacaa 524
Query: 61 ctgaatattcatgggagggacactttgttatacagcaaaaggtaactgatacaccatgaa 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 523 ctgaatattcatgggagggacacttggttatacagcaaaaggtaactgatacaccatgaa 464
Query: 121 aagaatggagtgtacgtttcagaactcctgacctgccttgaccctctccagcactcaaag 180
|||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 463 aagaatggcgtgtgcgtttcagaactcctgacctgccttgaccctctctagcacttaaag 404
Query: 181 tcttgcaaagactagcaataacttatatgaccatgagtcat-atcactatgcaaaggtaa 239
|||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 403 tcttacaaagactagcaatatcttatatgaccatgagtcattatcactatgcaaaggtaa 344
Query: 240 cattttagaattttatacttttagcgtaatttt-aattggcacttgtttttttttaatag 298
|||||||||||||||||||||||||| |||||| |||||| |||||||||||| |||||
Sbjct: 343 cattttagaattttatacttttagcgcaatttttaattggtacttgttttttta-aatag 285
Query: 299 cttaaaactcatgattagttatatagttaacagtcattctaaacaaactgactttcatag 358
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 284 tttaaaattcatgattagttatatagttaacagtctttctaaacaaactgactttcgtag 225
Query: 359 gataataagtgtgcacatatatag 382
|||||||||||| |||||||||||
Sbjct: 224 gataataagtgtacacatatatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 783
Length adjustment: 9
Effective length of query: 373
Effective length of database: 774
Effective search space: 288702
Effective search space used: 288702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_p02.g1 MSMg01no381_p02.g1 CHROMAT_FILE:
MSMg01no381_p02.g1 PHD_FILE: MSMg01no381_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:30 2005
(555 letters)
>mm_chr12_13754977_13755930
Length = 954
Score = 1006 bits (520), Expect = 0.0
Identities = 544/552 (98%), Gaps = 1/552 (0%)
Strand = Plus / Plus
Query: 1 tgtgtaatagtgtgtcattgataaatttatttatttgacttgactggagatgtttgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtaatagtgtgtcattgataaatttatttatttgacttgactggagatgtttgggaa 260
Query: 61 cttggtaatatgcagtataatggagtattggaaatatcgattccggagagtttgtgttgg 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 cttggtaatatgcagtataatggagtattggaaatatcgattcaggagagtttgtgttgg 320
Query: 121 gtttagttttatttcttgcagagtgactgggtttttagtaagtatgttggctgcaaggag 180
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 321 gtttagttttatttcttgcagagtgactggg-ttttagtaagtatgctggctgcaaggag 379
Query: 181 taaagagaaaatacaggttgaatgagtttttccaactacaatgtagaagaatttttccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaagagaaaatacaggttgaatgagtttttccaactacaatgtagaagaatttttccaa 439
Query: 241 cactgttctttctgatacagaattacttgagacatttagaagatagattaaagcaagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cactgttctttctgatacagaattacttgagacatttagaagatagattaaagcaagtgg 499
Query: 301 acagtcttttgttaggatgtggtattgttctagatagattcactgtctccagatgcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acagtcttttgttaggatgtggtattgttctagatagattcactgtctccagatgcccag 559
Query: 361 gaagaacataagggttcaaggttattttaaagaagagcagaggtgtggcagagctcgaga 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 560 gaagaacataagggttcaaggttatcttaaagaagagcagaggtgtggcagagcttgaga 619
Query: 421 atgagatgaaaacaccctagagatggatggcaaggatgctgactcactcgtgttccctac 480
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 atgagatgaaaacaccctacagatggatggcaaggatgctgactcacttgtgttccctag 679
Query: 481 agatggatggcaaggatgctgactcactcgtgttcccagggttctttaccttgttgtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agatggatggcaaggatgctgactcactcgtgttcccagggttctttaccttgttgtggt 739
Query: 541 caaaatggaaac 552
||||||||||||
Sbjct: 740 caaaatggaaac 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
