XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCCTTTTA
CTGCTCACTTCTAATGCACACAGTAATTTGTAACTGGATTTACTTTCAAT
TCATAACTTTGGTGATACAAGTAGTGTACTCAACATGTCATATAAGAGGC
ACTAAATAGTATTTGAGAAATAAGATGCCATCAACAACTATATCACCTTT
TCTGACATTATGAAGATTTTCACCTGTGCTTCAGAGGGAATTTTAATTCA
TGTAAATTCTACTATAATACATGAGCCCTAATAAGTATTAAGTAAGCAGT
TTCTTTTCCTTCTCTAAAATAGATGTTTAAGCTTTGATCATAGTAGGCTT
GGGTTATGAGAGCTAATAATTAGTTTCCTTTGGTATTCCCCTTTTTCTCA
TCAGAGCTAATCTTCTGTAGCACTTCAGTTACCCTCAGTTCTCTGACCAG
AGCTGCTACAAAGAACACCTGTTATCTTCCAGATAATTCTCTCTTCTTAT
CGACAGAATTTTAAGGGTGATAATTTAGTTGGGTAATATAATTTGTTATT
GGAGAAAGGGGAAGATGTAATTCGCAGATGTTAGTAAGCCTGGAAACTGA
AAACTTCTAAAGAAGATTTTTTAACAATTTTTACCTATAATGGAGATTGA
TACTATCAGAGATAAATGTCTCTTGCACTCTTTTCTAACCATATATTACC
TTATTTATTTTTTCCCGATGTACCTGGAACAACTAATCTCCCCTTAAACA
GGAAATTGAAG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAATAAGTTTGTAGGCCAGCCTTCCTGGCA
GTCCACAATGTCAGAGTGCCAGAGGCCTGTCTTAAACGATGACTAAGGAT
TGTCCTCTGATCTCCACATGCATGCTGTGGTATGTGCATGCCACTCTCCC
TCATACACTCAAACTTACAACAGCAACACACAGCTAAAATGGAGAGGAAT
GGCAAGCAGTGTAAATTAAAATGATGAACTCCATCAGTTATAAGGGACAT
ATAGCATAACAGCACAACTCTTATTCTATATAATAGTGGCAAAAATTGAG
AAGACTCATTGAAGAGAGCAAGTGCTGGTGAGCAGGCTGAGGGACTAAAA
GCCATACAAAGAGGACACATTGGTCAGTGTGTAAGATTGACAAGCATGGA
GCCATTGCTCTGTTCATCTGTTTACTGATGTGACATGACAACCCCTAGGG
CTTCCTATGGCTGGCTGGCTGGTCCTGAGGAAGGTCAAATGACCTCTCCA
TGGACAAATCTCTCACAAGAAAACCAATGACTCCTGAGCAACAGACTGTC
TCCACCTTTTAACACCCAAGCCAGTATTTTTCAAATACCATTTCAGGACC
AGGCATCATCCTGCATTTGAAACGTCCTGNTGTTCATTTTCACCCAGCCC
TGACATGGAGCCTTCTCTTTCTTTTATTTTGGAGAAATAAATTCTCACNG
GCAATCTGCCCTGGCAGTAAACATGGG

Query= MSMg01no382_e16.b1 MSMg01no382_e16.b1 CHROMAT_FILE:
MSMg01no382_e16.b1 PHD_FILE: MSMg01no382_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:00 2005
         (549 letters)



>mm_chr12_79640758_79641706
          Length = 949

 Score =  977 bits (505), Expect = 0.0
 Identities = 535/545 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttccttttactgctcacttctaatgcacacagtaatttgtaactggatttact 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttccttttaatgctcacttctaatgcacacagtaatttgtaactggatttact 264

                                                                       
Query: 65  ttcaattcataactttggtgatacaagtagtgtactcaacatgtcatataagaggcacta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcaattcataactttggtgatacaagtagtgtactcaacatgtcatataagaggcacta 324

                                                                       
Query: 125 aatagtatttgagaaataagatgccatcaacaactatatcaccttttctgacattatgaa 184
           ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 325 aatagtatttgagaaataagatgtcatcaacaaatatatcaccttttctgacattatgaa 384

                                                                       
Query: 185 gattttcacctgtgcttcagagggaattttaattcatgtaaattctactataatacatga 244
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gattttcacctgtacttcagagggaattttaattcatgtaaattctactataatacatga 444

                                                                       
Query: 245 gccctaataagtattaagtaagcagtttcttttccttctctaaaatagatgtttaagctt 304
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 gccctaataagtattaagtaagcagtttctttgccttctctaaaatagatgtttaagctt 504

                                                                       
Query: 305 tgatcatagtaggcttgggttatgagagctaataattagtttcctttggtattccccttt 364
           ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 505 tgatcatagtaggcttgggttatcagagctaataattagtttcctttggtatgccccttt 564

                                                                       
Query: 365 ttctcatcagagctaatcttctgtagcacttcagttaccctcagttctctgaccagagct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttctcatcagagctaatcttctgtagcacttcagttaccctcagttctctgaccagagct 624

                                                                       
Query: 425 gctacaaagaacacctgttatcttccagataattctctcttcttatcgacagaattttaa 484
           ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 gctacaaagcacacctgttatcttccagataattctctcttcttatcgacaggattttaa 684

                                                                       
Query: 485 gggtgataatttagttgggtaatataatttgttattggagaaaggggaagatgtaattcg 544
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 685 gggtgataatttagttgggtaatataatttgttattggagaaaagggaagatgtaattcg 744

                
Query: 545 cagat 549
           |||||
Sbjct: 745 cagat 749


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)