Query= MSMg01no383_b10.b1 MSMg01no383_b10.b1 CHROMAT_FILE:
MSMg01no383_b10.b1 PHD_FILE: MSMg01no383_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:02 2005
(561 letters)
>mm_chr12_37287767_37288727
Length = 961
Score = 789 bits (408), Expect = 0.0
Identities = 446/459 (97%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 104 tgcctacatctatatatgtgcaccacgtatgtgcctt-cccttgaaggccaaaagaaggt 162
||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 945 tgcctgcatctatatatgtgcaccacatatgtgccttccccttgaaggccaaaagaaggt 886
Query: 163 gccagaacccctgtacccagagttacagatagttgtgagtttctgtatggttgctgggaa 222
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 885 gccagaacccctgtacccagagttacagatagttgtgaaattctgtatggttgctgggaa 826
Query: 223 acaagctctggtcctctggaagagcagccagtgcttgtaaccactgaagaatctctccct 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 acaagctctggtcctctggaagagcagccagtgcttgtaaccactgaagaatctctccct 766
Query: 283 ccccatctactaatgatttaatatttatttgctgctcattttagttataaattgacacaa 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ccccatctactaatgatttaatatttatttgctgctcattttagttataaattgacacaa 706
Query: 343 ttcacaagatctaatgaacaaactttcttctgtcttgtcttangacacatgttgtttgtt 402
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 705 ttcacaagatctaatgaacaaattttcttctgtcttgtcttaggacacatgttgtttgtt 646
Query: 403 tgttttttataagttaaacaaatattatcactgacactggaaacctcaaagaagccacta 462
||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 645 tgttttttataagttcaacaaatattatcactgacacaagaaacctcaaagaagccacta 586
Query: 463 gcattcccaaagcttggactccacacaccagccatactgcagaaggcccaacagctactt 522
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 585 gcattcccaaagcttgggctccacacaccggccatactgcagaaggcccaacagctactt 526
Query: 523 ctgacaccatccagtgatgtccacaggatattttccatc 561
| |||||||||||||||||||||||||||||||||||||
Sbjct: 525 ccgacaccatccagtgatgtccacaggatattttccatc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_b10.g1 MSMg01no383_b10.g1 CHROMAT_FILE:
MSMg01no383_b10.g1 PHD_FILE: MSMg01no383_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:02 2005
(529 letters)
>mm_chr12_37249260_37250188
Length = 929
Score = 1007 bits (521), Expect = 0.0
Identities = 527/529 (99%)
Strand = Plus / Plus
Query: 1 actgaggagaaagatcagagtccatgctggcctaactagctaagaaatggggcctgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaggagaaagatcagagtccatgctggcctaactagctaagaaatggggcctgaaat 260
Query: 61 ctataacactttttatcccttggagagggcatccagacagtctcagaaatacctagttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctataacactttttatcccttggagagggcatccagacagtctcagaaatacctagttct 320
Query: 121 gtaaattcaagcctattgtgtagtatgggagtttaattctttttaggtaattggtaacat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gtaaattcaagcctattgtgtagtatgggagcttaattctttttaggtaattggtaacat 380
Query: 181 aggtaagattttaacataaaacaaagacaaaactttgtattaaacaaaactctaatgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtaagattttaacataaaacaaagacaaaactttgtattaaacaaaactctaatgtga 440
Query: 241 tcaatgacagaacaagcaagttgggtagagtggaatttagttcattcactggccaagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaatgacagaacaagcaagttgggtagagtggaatttagttcattcactggccaagtgt 500
Query: 301 atttgattatgtgccctaaagataggttctaaggtgcagctactatggaaacttatcacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgattatgtgccctaaagataggttctaaggtgcagctactatggaaacttatcacg 560
Query: 361 tgagtgatttcctgagcaacagggtgtcattgaatgttttaggaaggttatggagtcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagtgatttcctgagcaacagggtgtcattgaatgttttaggaaggttatggagtcaac 620
Query: 421 tcagtggtggaacactgcagtgctttgagggtggaaggacatatttgaagtcctggactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 tcagtggtggaacactgcagtgctttgagggtggaaggacatatttgaagtcctggattg 680
Query: 481 agccctccattccacatttctttgtacagagatcttcattttatcttca 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agccctccattccacatttctttgtacagagatcttcattttatcttca 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
