Query= MSMg01no385_n09.b1 MSMg01no385_n09.b1 CHROMAT_FILE:
MSMg01no385_n09.b1 PHD_FILE: MSMg01no385_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:31 2005
(505 letters)
>mm_chr12_39370678_39371583
Length = 906
Score = 955 bits (494), Expect = 0.0
Identities = 500/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Minus
Query: 5 gaatt-caaatctattgtaatctacccttgtaacttggggaaagtgaaaaagttttgaac 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaattccaaatctattgtaatctacccttgtaacttggggaaagtgaaaaagttttgaac 647
Query: 64 ctctctgggaatccattgtggacagtagaaaagggactgaatacttgcttagatctactc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ctctctgggaatccattgtggacagtagaaaagggactgaatacttgcttagatctactc 587
Query: 124 ttatcctaatatatctccaggccacttaatgaaagtgaggtagcatttgtacttgttctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttatcctaatatatctccaggccacttaatgaaagtgaggtagcatttgtacttgttctg 527
Query: 184 tgcatgggcacaattgtagtaagatagaacaatgctcctccttagcaccactgagatggg 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 526 tgcatgggcacaattgtagtaagatagaacaatgctccttcttagcaccactgagatggg 467
Query: 244 ttgcatcgtcttcacaacctactaatgtagatattttaataattcacaaaacatcacttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgcatcgtcttcacaacctactaatgtagatattttaataattcacaaaacatcacttt 407
Query: 304 taaaaataaccaattaaattggcatttttagtctttgaatggcagcaggctggttatatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 taaaaataaccaattaaattggcatttttagtctttgaatggcagcaggctggttatatt 347
Query: 364 aatattaactcaaattatggacaggttttatttctttcagcattttgatgactgtcaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aatattaactcaaattatggacaggttttatttctttcagcattttgatgactgtcaaat 287
Query: 424 atcagatataagtaaaatcttttctaaagaaatctatattgattttgtttagaccttgat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atcagatataagtaaaatcttttctaaagaaatctatattgattttgtttagaccttgat 227
Query: 484 ttgttatggtcatgataaatgt 505
||||||||||||||||||||||
Sbjct: 226 ttgttatggtcatgataaatgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space: 443520
Effective search space used: 443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_n09.g1 MSMg01no385_n09.g1 CHROMAT_FILE:
MSMg01no385_n09.g1 PHD_FILE: MSMg01no385_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:31 2005
(453 letters)
>mm_chr12_39234104_39234956
Length = 853
Score = 818 bits (423), Expect = 0.0
Identities = 443/453 (97%), Gaps = 6/453 (1%)
Strand = Plus / Plus
Query: 1 atcttgctctataaatatgcagtgcacagttacagtgtatggtttttgagagtgtgcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttgctctataaatatgcagtgcacagttacagtgtatggtttttgagagtgtgcaat 260
Query: 61 gaacaactaaagttaaattttatttattttttgttttaatctaagttatagatatagata 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacaactaaagttaaatgttatttattttttgttttaatctaagttatagatatagata 320
Query: 121 tacaacactcaatactgactgtttatccatttatttaaaatcataatatcaaagagagta 180
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tacaatactcaatactgactgtttatccatttatttaaaatcatagtatcaaagagagta 380
Query: 181 gaaggcaaaagcattctacttacgctagtgggaatgaaatgtttttatatgagtctatgc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggcaaaagcattctacttatgctagtgggaatgaaatgtttttatatgagtctatgc 440
Query: 241 tcttactgtaaccaagatgggaaagaacataacatctctgctttctttaccatagttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttactgtaaccaagatgggaaagaacataacatctctgctttctttaccatagttaga 500
Query: 301 agatgtaaggagaaaaatgtcatgggaaattagtcagaatttgaaaactttgcctttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatgtaaggagaaaaatgtcatgggaaattagtcagaatttgaaaactttgcctttttc 560
Query: 361 cttacaccctcaacacaagtaatatctctctctctctctctctctctctctctctctctc 420
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 cttacaccctcaacacaagtaat------ctctctctctctctctctctctctctctctc 614
Query: 421 tctctctctctctctcacacacacacacacaca 453
|||||||||||||||||||||||||||||||||
Sbjct: 615 tctctctctctctctcacacacacacacacaca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
