TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATGATGTTTCCTGTAATCCAGAGGTCTTATAAAAATAATTTCTAT
ACTGTCAAATAAACTTCTCTGAAAAGGGTTGAATGAGACACTTATTGATG
GGCGTAGAATTATGTTATTAGGAGTCATTTAATTGCTATGTTCCTTTAGC
AAAATAATATTATGTTTTCTCCTAACCCCATGACCTATCTAGTCTCAGGT
TCTTGGTTACTTTATCAGTGCCAACAGGATTCATTGCATATGAGAAGACA
AACAGAGTTTGGCACCTTGCCCTAGACCTTCACATGTTCAAGCCAGCTGG
GCTATCAGAACTGATAGAAAAAAATGGACTTTGGTGGTTTGGATAGGATG
GGCTCCAATAGACCCTACTCTTTCAATGACTGGGTCATAGGGAGTAGTGC
TACTAGGAGGTGTGCCTTTCCTGGAATAGGTATATCTTTGTTGGATGAAG
TTTGTCACTGTCTGCTTCCACAGGCTTTGAGGTTTAATAAGTTCAATTCT
GGCCAGTGTAGCACAGTCCCTCCTGCTGTCTGTGGATCAAGATTAGAACT
TCCAGCTCTGCTTTCAGCACCCTGTCTAAATGCAAGCTATCATGTTTCCT
GCCATGATGATACTGCAGTAAATATCTGAAACTGGAGGACAGACAAACGC
TTTCCTTAGTATTTTGCAGCCATCATTAAAACC

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGTAAATCTCCTCAGTACATCACA
GGACTGATGTACACTTAAACATACAATCTGCGATCACTTCCTTATATAAA
TCTGCAAAATTATGTGATATGTCACTAAACAGCAAAAGTGTGTGATTACC
TTAAAGGAAATTAATATTTTGAATAAAATTCAATTCAAGATGAAAAATTT
CCTTTAAAAAAAAAGAGAATGAGAGGAATTGGGGAGAGGTGATTTTATTA
TTACAAATTATGTTCGTTTTTGTATATTTCTATGTGCACAATCTTTCTTT
GGTTGCCCACAAATGTTGCACGTGACAGCATTATTGTCAATCAATATGAA
TTAAATAGGATGTTTGTGCTTGTTGGCTTGGCAGTGTGTGGAATTATAAA
CAGGGCCTTGTATATTTTAAGAAGGTTCTCTAATGAAACCCTTAATAGTA
ATTCTTAGAGGCAAGTTTCCATTTATCAAATTTATTGGCTGAAATAGCCA
AAGATTAGAGCAGGTTCAAGATCCTGACATGTTCTGATACAGAAAACATC
AGAATGGCTGCAACTTAAAGACCTAATTTATGAGGATATTAAGCTTTATA
AATGGATATAACAAGAGGAAAAATTTTACTTGAGACCACAGTTGTCAAAC
ACTATCAGAAATAAAAACGTGAGTATTCTTTAT

Query= MSMg01no386_g05.g1 MSMg01no386_g05.g1 CHROMAT_FILE:
MSMg01no386_g05.g1 PHD_FILE: MSMg01no386_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:11 2005
         (612 letters)



>mm_chr12_95134970_95135981
          Length = 1012

 Score =  984 bits (509), Expect = 0.0
 Identities = 541/557 (97%), Gaps = 10/557 (1%)
 Strand = Plus / Minus

                                                                        
Query: 56   cgatcacttccttatataaatctgcaaaattatgtgatatgtcactaaacagcaaaagtg 115
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 cgatcacttccttatataagtctgcaaaattatgtgatatgtcactaaacagcaaaagtg 953

                                                                        
Query: 116  tgtgattaccttaaaggaaattaatattttgaataaaattcaattcaagatgaaaaattt 175
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 952  tgtgattaccttaaaggaaattaatattttgaataaaattcaattcaagatgaaaatttt 893

                                                                        
Query: 176  cctttaaaaaaaaagagaatgagaggaattggggagaggtgattttattattacaaatta 235
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 892  ccttt-aaaaaaaagagaatgagaggaattggggacaggtgattttattattacaaatta 834

                                                                        
Query: 236  tgttcgtttttgtatatttctatgtgcacaatctttctttggttgcccacaaatgttgca 295
            |||||||||||||||||||||         ||||||||||||||||||||||||||||||
Sbjct: 833  tgttcgtttttgtatatttct---------atctttctttggttgcccacaaatgttgca 783

                                                                        
Query: 296  cgtgacagcattattgtcaatcaatatgaattaaataggatgtttgtgcttgttggcttg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  cgtgacagcattattgtcaatcaatatgaattaaataggatgtttgtgcttgttggcttg 723

                                                                        
Query: 356  gcagtgtgtggaattataaacagggccttgtatattttaagaaggttctctaatgaaacc 415
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 722  gcagtgtgtggaattataaacagagccttgtatattttaagaaggttctctaatgaaacc 663

                                                                        
Query: 416  cttaatagtaattcttagaggcaagtttccatttatcaaatttattggctgaaatagcca 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  cttaatagtaattcttagaggcaagtttccatttatcaaatttattggctgaaatagcca 603

                                                                        
Query: 476  aagattagagcaggttcaagatcctgacatgttctgatacagaaaacatcagaatggctg 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  aagattagagcaggttcaagatcctgacatgttctgatacagaaaacatcagaatggctg 543

                                                                        
Query: 536  caacttaaagacctaatttatgaggatattaagctttataaatggatataacaagaggaa 595
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 542  caacttaaagacctaatttatgaggatattaagctttataaatggatataacaagatgaa 483

                             
Query: 596  aaattttacttgagacc 612
            || ||||||||||||||
Sbjct: 482  aatttttacttgagacc 466


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)