CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACAGAAGACCGCGGA
ATTCCACAGCTTTTCTAAATCTAGGGTGCCCCACCTCAGGCTTGCTCAGT
TCAGAACAGCCTCTCTGGTGGGCATTCAGTACAGGGAACTCTGAACAGCA
GGAGAGCGCAGCAAGTGACCTTGCCCATCAGGCTGCTCTGGGGAGCTTCT
GGCAGCTGCTTTCTTCTCTGTCACAGAGATGGGATGCATTTTTGAGCATG
GCCAAGCCGGAAGTGCGAGGATTCTTAGATGGACATTTCATAATTGAGGG
TGATGAGCTGGTAGGGACCCTTCTGTACCCCACCCATGACCCCTGGCTGC
TGATCTCTGTCAGCAGACTGTGTTAGGATAGAATAGACAGGAGATGGGAA
ATTCAGCTCTTTCCCAAAGCTTGGTTTTATGTCATCTCTAATTGCTGTTA
ATTCTCCAGGAAATATTTATAAACTTGGACTAAAATAGAAACCTGGAAAC
ATTAATTTCATTTAAACAAAATGCTAAGTACTCCTGTCTATAATTTTCAT
ATCTAAAAATGTACATAATATTATCTGGTTAAACAATTTAATAAAGATCT
CTTTAAGCAAAATTATATAATTGATATGAATACATTTTAGAGATTGACTG
TACTAAGTACTTATAAGATAGCATTTTTACTTATTATCACTGTTTTTAAT
ATTCAAAATATTGGAGACGTTTACAG

CATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTGATAAAATATATAATTATTGTTT
AAATTCTCTGTCCTGGGATTCACCTAGGTAATTCTCATTAGAGAATACTT
CTACAGAGCTAGGAGATTTGGTAGGAAATATGATGTCTTGACCATTCATC
TTGATTTTTTTTTTAATTTGACATAGGCATGTAGATTTCTTTTGTTGGTT
ATGGTTCAGATATGAGAATCTGACCTGCCTTAGATTAGACCAATGCAAGA
GCCTCATGACTGGAGCATGGTCTGTTATAGCTGGTAGATGACTCTAAATC
TTTGTTTTGTCTCCTCAGATGAAGGGATGAAATGAGAACCCTACCTAAGC
TTTATGAATACTCGGTTTGGGCTGAGCCCAGAGCATTTTCTCCTCTGTTC
TAACTATCCCTAGGCCTTAGTCCTGGAAGCTTCTAGCCTCCATAAAATCT
TTTTTTTTAAATTTTGTTTTTTTTAATTAGGTATTTATTTCATTTACATT
TCCAATGCTATCCCAAAAGTCCCCCACCTGCTCCCCCACCCACTCCCCTA
CCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATA
TAAAGTTTGCAAGACCAATGGGCCTCTCTTTCTAATGATGGTCGACTAGG
CCATCTTCTGATACATATGCAGCTAG

Query= MSMg01no386_i12.b1 MSMg01no386_i12.b1 CHROMAT_FILE:
MSMg01no386_i12.b1 PHD_FILE: MSMg01no386_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:21 2005
         (581 letters)



>mm_chr12_45654867_45655847
          Length = 981

 Score = 1046 bits (541), Expect = 0.0
 Identities = 571/581 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggtgccccacctcaggcttgctcagttcagaacagcctctctggtgggcattcagtac 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 201 agggtgccccacctcaggcttgcacagttcagaacagcctctctggtgggcattcagtaa 260

                                                                       
Query: 61  agggaactctgaacagcaggagagcgcagcaagtgaccttgcccatcaggctgctctggg 120
           ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaactctgaacatcaggagagcacagcaagtgaccttgcccatcaggctgctctggg 320

                                                                       
Query: 121 gagcttctggcagctgctttcttctctgtcacagagatgggatgcatttttgagcatggc 180
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gagcttctggcagttgctttcttctctgtcacagagacgggatgcatttttgagcatggc 380

                                                                       
Query: 181 caagccggaagtgcgaggattcttagatggacatttcataattgagggtgatgagctggt 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagccggaagtgtgaggattcttagatggacatttcataattgagggtgatgagctggt 440

                                                                       
Query: 241 agggacccttctgtaccccacccatgacccctggctgctgatctctgtcagcagactgtg 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggaccctgctgtaccccacccatgacccctggctgctgatctctgtcagcagactgtg 500

                                                                       
Query: 301 ttaggatagaatagacaggagatgggaaattcagctctttcccaaagcttggttttatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaggatagaatagacaggagatgggaaattcagctctttcccaaagcttggttttatgt 560

                                                                       
Query: 361 catctctaattgctgttaattctccaggaaatatttataaacttggactaaaatagaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctctaattgctgttaattctccaggaaatatttataaacttggactaaaatagaaac 620

                                                                       
Query: 421 ctggaaacattaatttcatttaaacaaaatgctaagtactcctgtctataattttcatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggaaacattaatttcatttaaacaaaatgctaagtactcctgtctataattttcatat 680

                                                                       
Query: 481 ctaaaaatgtacataatattatctggttaaacaatttaataaagatctctttaagcaaaa 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctaaaaatgtatataatattatctggttaaacaatttaataaagatctctttaagcaaaa 740

                                                    
Query: 541 ttatataattgatatgaatacattttagagattgactgtac 581
           ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 ttatataattgatatgaatacattttacagattgactgtac 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)