Query= MSMg01no386_o11.b1 MSMg01no386_o11.b1 CHROMAT_FILE:
MSMg01no386_o11.b1 PHD_FILE: MSMg01no386_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:48 2005
(683 letters)
>mm_chr12_71092501_71093582
Length = 1082
Score = 1259 bits (651), Expect = 0.0
Identities = 672/679 (98%), Gaps = 1/679 (0%)
Strand = Plus / Minus
Query: 5 gaattctctaatatctcgttgaggatagatgaatatttcgtctccatgtccacttaccac 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gaattctctaatagcttgttgaggatagatgaatatttcgtctccatgtccacttaccac 766
Query: 65 ttttggagatctttacctcgaccctttcaacaagcagggcgtggaccatctggtcagata 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ttttggagatctttacctagaccctttcaacaagcagggcgtggaccatctggtcagata 706
Query: 125 ggtttgccgtggagatactgactacctcttggttcccatgagatatagaaccaatagaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ggtttgccgtggagatactgactacctcttggttcccatgagatatagaaccaatagaaa 646
Query: 185 cattttcatgtagagcctataatagcagatcgaagtaaactttattgaattctcaaaaga 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cgttttcatgtagagcctataatagcagatcgaagtaaactttattgaattctcaaaaga 586
Query: 245 catcttaccatatgccaaggaaagactatttctggctaaagataaggtgaaatcttagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 catcttaccatatgccaaggaaagactatttctggctaaagataaggtgaaatcttagaa 526
Query: 305 gataaaagtttctccatccagaaaagcgaaacagaaagacctataacagacagaggaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gataaaagtttctccatccagaaaagcgaaacagaaagacctataacagacagaggaagt 466
Query: 365 cagaggacaggaatggcaagagtaagacttggtctgactttcagactgttggatgaactc 424
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cagaggacaggaatgacaagagtaagacttggtctgactttcagactgttggatgaactc 406
Query: 425 taaatccaggcagtaacagtaatctacaaagcagccttaaactgctatgatgaaatgcct 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 405 taaatccaggcagtaacagtaatcta-aaagcagccttaaactgctatgatgaaatgcct 347
Query: 485 gaggcagctaactcacaagggaaaggaatcttgttgggttccgttttagatgttcatagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaggcagctaactcacaagggaaaggaatcttgttgggttccgttttagatgttcatagg 287
Query: 545 cagtagctcaatcccgatgggtgatagcacacaaggcaggaaggaattcacacagtgtct 604
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cagtagctcaatcccgatgagtgatagcacacaaggcaggaaggaattcacacagtgtct 227
Query: 605 gtctactagctctcatctagctaggatggagggatgggaggggaaagaaggaaggaagca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtctactagctctcatctagctaggatggagggatgggaggggaaagaaggaaggaagca 167
Query: 665 gaaggaatggaaagcgaga 683
|||||||||||||||||||
Sbjct: 166 gaaggaatggaaagcgaga 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_o11.g1 MSMg01no386_o11.g1 CHROMAT_FILE:
MSMg01no386_o11.g1 PHD_FILE: MSMg01no386_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:48 2005
(678 letters)
>mm_chr12_70930693_70931770
Length = 1078
Score = 1295 bits (670), Expect = 0.0
Identities = 676/678 (99%), Gaps = 1/678 (0%)
Strand = Plus / Plus
Query: 1 tccaggtaactgaaatgcacaaacatgtaaacaattcagtgattcattgaggccaggccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaggtaactgaaatgcacaaacatgtaaacaattcagtgattcattgaggccaggccc 260
Query: 61 tcaaatcactcactgttgaataaagacaggtctagaatacgaagaaactacattagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaatcactcactgttgaataaagacaggtctagaatacgaagaaactacattagagaa 320
Query: 121 acagaatgtgggttcctgaccaccactacagcattattttcccatgacatctgctaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagaatgtgggttcctgaccaccactacagcattattttcccatgacatctgctaatac 380
Query: 181 atcatcattacacacaatatattcagactaaaccaaaagccatgccaggaatggtggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcatcattacacacaatatattcagactaaaccaaaagccatgccaggaatggtggcag 440
Query: 241 atgcctgcaagttcgaggccaacgtggcctaactaggaagtgctaagcaagccagggcta 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 atgcctgcaagttcgaggccaacgtggcctaactaggaagtgctaggcaagccagggcta 500
Query: 301 tataacatgtcctgttgcaaagcaaacaattgaaaaacaaaacaaaacaaacaaaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataacatgtcctgttgcaaagcaaacaattgaaaaacaaaacaaaacaaacaaaaaaaa 560
Query: 361 aatagaagaaaacaacccctcccccatacaacagagaccctttaagacattttcatgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatagaagaaaacaacccctcccccatacaacagagaccctttaagacattttcatgaca 620
Query: 421 tttttgtcaataatgtaagtcagagctctacactggtaactttaagacaaatctccatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttttgtcaataatgtaagtcagagctctacactggtaactttaagacaaatctccatca 680
Query: 481 gaactgttcacataatcaagttatgaattagaaagcaccttacctgcctgtatttgctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaactgttcacataatcaagttatgaattagaaagcaccttacctgcctgtatttgctcc 740
Query: 541 atccacaaaaggattccaatgtaatataaagtttggctctgatgataatccctgtgcagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atccacaaaaggattccaatgtaatataaagtttggctctgatgataatccctgtgcagg 800
Query: 601 tcacagtt-agagtgttactttcacacattaatatcacccttccgattcactaattacac 659
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcacagtttagagtgttactttcacacattaatatcacccttccgattcactaattacac 860
Query: 660 atcagacaaataatctgc 677
||||||||||||||||||
Sbjct: 861 atcagacaaataatctgc 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
