Query= MSMg01no386_o21.b1 MSMg01no386_o21.b1 CHROMAT_FILE:
MSMg01no386_o21.b1 PHD_FILE: MSMg01no386_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:50 2005
(470 letters)
>mm_chr12_60669339_60670208
Length = 870
Score = 839 bits (434), Expect = 0.0
Identities = 458/466 (98%)
Strand = Plus / Plus
Query: 5 gaattcttacatcaccaatttatggataaacactattacaaggattcatttgtaagtcag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacatcaacaatttatggataaacactattacaaggattcatttgtaagtcag 264
Query: 65 gaaagtgaggttcaaacatccaggtgatttgctcagtggttctcagcaatgcagcaaatg 124
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 gaaagtgaggttcagacatccaggtgatttgctcagtggttctccgcaatgcagcaaatg 324
Query: 125 tttacaggaattcaggtctggcttctttggctttttcctccatcccttactaaatccctc 184
||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 tttacaggaattcagatctggtttctttggccttttcctccatcccttactaaatccctc 384
Query: 185 agtgagggaagatcagttttaaaggactccaaccccagtggcgtggttcagtggtgcata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgagggaagatcagttttaaaggactccaaccccagtggcgtggttcagtggtgcata 444
Query: 245 aagcagaagatccttgtaaaagatttgaaaaaactgtagagcccatgtttacaagtatgc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 aagcagaagatccttgtaaaagatttgaaaaaactgtagagcccatgtttacgagtatgc 504
Query: 305 ttgtcagcttcataaatttcgctttaaccagcactttcgatattgtttaattgcgtctgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgtcagcttcataaatttcgctttaaccagcactttcgatattgtttaattgcgtctgt 564
Query: 365 gtcattaaaatatggtctttactgtttcttaaacaacacacaaaactttctagtgaatta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcattaaaatatggtctttactgtttcttaaacaacacacaaaactttctagtgaatta 624
Query: 425 ttaatatatatacactgtttttttaagtataaatgtaaagcagtga 470
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 ttaatatatatacactgttttttaaagtataaatgtaaagcagtga 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_o21.g1 MSMg01no386_o21.g1 CHROMAT_FILE:
MSMg01no386_o21.g1 PHD_FILE: MSMg01no386_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:50 2005
(496 letters)
>mm_chr12_60824722_60825617
Length = 896
Score = 694 bits (359), Expect = 0.0
Identities = 373/383 (97%), Gaps = 10/383 (2%)
Strand = Plus / Minus
Query: 1 aggagagatacatttggctacattgagctctatttgagagagttgcactaggcattagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggagagatacatttggctacattgagctctatttgagagagttgcactaggcattagaa 323
Query: 61 atagcaaagtaggtagcacggatcttttcgctaggaaaatctgataacttaaattatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atagcaaagtaggtagcacggatcttttcgctaggaaaatctgataacttaaattatgat 263
Query: 121 ggaagaaagaatcccccaagttaaaatcgtcagcttgctacagtgagagaagcgtcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggaagaaagaatcccccaagttaaaatcgtcagcttgctacagtgagagaagcgtcagcc 203
Query: 181 gagaagcttcgatggaggaattgcccggatcagattgtctgtgggtctgtgagggattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gagaagcttcgatggaggaattgcccggatcagattgtctgtgggtctgtgagggattct 143
Query: 241 cttgtattattaattgatatggaaaagcccagaggagtagcacattcatcagacagctgg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cttg-attattaattgatatggaaaagcccagaggagtagcacattcatcagacagctgg 84
Query: 301 tcctggtctgtataaa---------gaaacatgagccagagagtgagctcaagagtaggc 351
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 83 tcctggtctgtataaagggaccaacgaaacatgagccagagagtgagctcaagagtaggc 24
Query: 352 cctgaagcagagttcccccacgg 374
|||||||||||||||||||||||
Sbjct: 23 cctgaagcagagttcccccacgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
