Query= MSMg01no388_a05.b1 MSMg01no388_a05.b1 CHROMAT_FILE:
MSMg01no388_a05.b1 PHD_FILE: MSMg01no388_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:14 2005
(317 letters)
>mm_chr12_65017664_65018378
Length = 715
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 1 agatttttggaaaagcggaaaagtttgtgataaaaagaaacctaccagggatcaataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatttttggaaaagcggaaaagtttgtgataaaaagaaacctaccagggatcaataaaa 260
Query: 61 tttcatttccactagaggcttccttatattttattatctccctacttctccatagagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcatttccactagaggcttccttatattttattatctccctacttctccatagagcca 320
Query: 121 cctaaggtgtgcaggatacgaagagtacagtcttttccccaaggtattataaaatccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaaggtgtgcaggatacgaagagtacagtcttttccccaaggtattataaaatccatt 380
Query: 181 tggaaggtcatgttccttcccattcttgaaattctcattgcttagaatgtgtcttgcact 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tg-aaggtcatgttccttcccattcttgaaattctcattgcttagaatgtgtcttgcact 439
Query: 241 tcagaattcttaaggtcataataaaagaaaataaaaataccatgtgatatgtgaaacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagaattcttaaggtcataataaaagaaaataaaaataccatgtgatatgtgaaacatt 499
Query: 301 tgangctgtacttattc 317
||| |||||||||||||
Sbjct: 500 tga-gctgtacttattc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 715
Length adjustment: 9
Effective length of query: 308
Effective length of database: 706
Effective search space: 217448
Effective search space used: 217448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_a05.g1 MSMg01no388_a05.g1 CHROMAT_FILE:
MSMg01no388_a05.g1 PHD_FILE: MSMg01no388_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:14 2005
(417 letters)
>mm_chr12_65243454_65244271
Length = 818
Score = 777 bits (402), Expect = 0.0
Identities = 414/418 (99%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 1 tctaaactaatgaatatttggacttccattacttgtgaaatgtctattattattttcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tctaaactaatgaatatttggacttccattacttgtgaaatgtctattattattttcact 367
Query: 61 gttggacaccattcctgaaggctgaacatagttacttctttattcata-ttttttttatt 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 366 gttggacaccattcctgaaggctgaacatagttacttctttattcatatttttttttatt 307
Query: 120 tctctctagctagaaagacctaatatatgcatattctgtattaactagcttgctgaggca 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctctctagctaaaaagacctaatatatgcatattctgtattaactagcttgctgaggca 247
Query: 180 attttcttcctctgaatatttactctatataaaatatttttttaagaaataggaaacagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attttcttcctctgaatatttactctatataaaatatttttttaagaaataggaaacagt 187
Query: 240 agaatataactatttaaaaagtgtaataaggatgctgaagtgtagctctccactattgat 299
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agaagagaactatttaaaaagtgtaataaggatgctgaagtgtagctctccactattgat 127
Query: 300 ggctctggcagggatgcagaaaaggaaggactcagttctatttatgggacaggccactga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggctctggcagggatgcagaaaaggaaggactcagttctatttatgggacaggccactga 67
Query: 360 gcttaactatccttcagtgagtttattgttgctgtggtgggtgttttgtttagtggtg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gcttaactatccttcagtgagtttattgttgctgtggtgggtgttttgtttagtggtg 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 818
Length adjustment: 9
Effective length of query: 408
Effective length of database: 809
Effective search space: 330072
Effective search space used: 330072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
