XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGAGA
TTTACAAATTCAATGACTTATATTTTTGCACTTTTTCTGCTGATAGCTTA
AGTCTCCACAGCTGCTTCTCACATCTTCACCATATATCTCCCATGCTCCT
ACAGTGGTAGCTGTGACTAAGAGAAGGGGATTAATGCCTGTAATCTCAAG
CAGCTGAATTCCACAAATGCTTTAGCTCTCTGGATCCTTCTTGTATCCGT
GGATGTGTTGCATAGATGTACGTTTCCTCCATTCCAATGTTTGTCTTCTT
TCATTACATCTGCTCCCCAATGAAGTTTATTTCAAATAAATTCTTAGAAG
TACAGAATCCCAAGCAGTGTAGTCTGTGTTCTGATCTCTGGCGCTATTTA
TATACACAGCACTGGTCCATTAAAAATAATTATATTCTCTTTGTTATAAT
GTATCTTGTTAGCTTGCTATTCTTGACTCTCTAAGAAGTCTTATTTTGTT
GAAGCTATGCGGTTACTTTATATGGCAAGAGTGTTTTAAGCCTCTCTGTA
TTCTCACCCTTCCCAGAAGAGCCCTTAAGATGTGATTGTTATGTAAATTG
ACTCTTGCTTANAATGTGCACTGGATAAAGGCACAGACTCTTCCTTACTA
CAGTGGCACAGAGAGATGCCTAACATGGTGACAGAAAATTCCCCATCAGC
TCTTGCTCTGAATAAAGTGGAAAGAAGTGCTGCTGGACTAAAGGGGGGTT
GAATTTTGTAAGN

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACGAGGCCATCCCAAAAGCC
TTGCTTGACTCTGACTCAGGTCAAGTCCCTTGTTAATTATTAAACATTAG
AATTGTATTTAATTCATCTTTGTATCTGTAGCTGTTAGTAATTATTCAAT
CAGTGGGATATCCTTCTCTGGAGTAGTGGGTTTGCGTTCTATTCTTGTCT
TCAATTTGTTATCCTCCTGTGTTAAAATTTAAATTAAAAAGAGTGAATAA
GTAAAATTATTTATTAAGATTCTACTGAAAAGCTATTCTGTAAAAAAGCA
AAGTGTATTTACTCTAATTAAGAAAAAAAATACAAATTGCATGTGTTCTT
TTCCTCATTTCCATGGAGACTTGGGTGTTAAATATTGCTTTCAGTTTATA
TCCCAGCACACAATTTCAAAAAGGACGAAAGTAGGATTTCCACTGACAAC
ATAATTGATGGATGATTGACTACTTCTTGATGTAGAAGATAACTTTATGT
ACACAATGAGATGCGATTTAGCGTGGATGATTGTGGAAGCTTACATTTCA
ACCATCAAAGTCAATCATTCATGTCAAGAAGGGGATAATACAAGCCAGGC
AAAAGTTCATATGCAAAATACACTGGAATATTAAATCATCTCCAAGCATG
TTATGATCCTAATGCACAGAAAAAAAAAGACCTTAAAATAGTGTGCAGAT
CG

Query= MSMg01no388_j13.b1 MSMg01no388_j13.b1 CHROMAT_FILE:
MSMg01no388_j13.b1 PHD_FILE: MSMg01no388_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:58 2005
         (488 letters)



>mm_chr12_40393737_40394624
          Length = 888

 Score =  859 bits (444), Expect = 0.0
 Identities = 477/488 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacttatatttttgcactttttctgctgatagcttaagtctccacagctgcttctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgacttatatttttgcactttttctgctgatagcttaagtctccacagctgcttctcac 260

                                                                       
Query: 61  atcttcaccatatatctcccatgctcctacagtggtagctgtgactaagagaaggggatt 120
           ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 atcttcagcatatatctcccatgctcctacagtggtggctgtgactaagagaaggggatt 320

                                                                       
Query: 121 aatgcctgtaatctcaagcagctgaattccacaaatgctttagctctctggatccttctt 180
           |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aatgcctgtaatctcaagcaactgaattccgcaaatgctttagctctctggatccttctt 380

                                                                       
Query: 181 gtatccgtggatgtgttgcatagatgtacgtttcctccattccaatgtttgtcttctttc 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 gtatccgtggatgtgttgcatagatgtacgttttctccattccaatgtttgtcttctttc 440

                                                                       
Query: 241 attacatctgctccccaatgaagtttatttcaaataaattcttagaagtacagaatccca 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 attacatctgctccccaatgaagtttatttcaaataaattcttagaagtacaaaatccca 500

                                                                       
Query: 301 agcagtgtagtctgtgttctgatctctggcgctatttatatacacagcactggtccatta 360
           | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 aacagtgtagtctgtgttctgatctctgacgctatttatatacacagcactggtccatta 560

                                                                       
Query: 361 aaaataattatattctctttgttataatgtatcttgttagcttgctattcttgactctct 420
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 aaaataattatattctctttgttataatgtatcttgttaggttgctattcttgactctct 620

                                                                       
Query: 421 aagaagtcttattttgttgaagctatgcggttactttatatggcaagagtgttttaagcc 480
           |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 621 aagaagtcttattttgttgaagatatgcggttactttatatggcgagagtgttttaagcc 680

                   
Query: 481 tctctgta 488
           ||||||||
Sbjct: 681 tctctgta 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no388_j13.g1 MSMg01no388_j13.g1 CHROMAT_FILE:
MSMg01no388_j13.g1 PHD_FILE: MSMg01no388_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:58 2005
         (607 letters)



>mm_chr12_40506156_40507162
          Length = 1007

 Score = 1151 bits (595), Expect = 0.0
 Identities = 604/607 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacgaggccatcccaaaagccttgcttgactctgactcaggtcaagtcccttgttaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 cacgaggccatcccaaaagccttgcttgactctgactcaggtcaagtcccttgttaatta 748

                                                                       
Query: 61  ttaaacattagaattgtatttaattcatctttgtatctgtagctgttagtaattattcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttaaacattagaattgtatttaattcatctttgtatctgtagctgttagtaattattcaa 688

                                                                       
Query: 121 tcagtgggatatccttctctggagtagtgggtttgcgttctattcttgtcttcaatttgt 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 687 tcagtgggatatccttctctggagtagtgggtttgtgttctattcttgtcttcaatttgt 628

                                                                       
Query: 181 tatcctcctgtgttaaaatttaaattaaaaagagtgaataagtaaaattatttattaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tatcctcctgtgttaaaatttaaattaaaaagagtgaataagtaaaattatttattaaga 568

                                                                       
Query: 241 ttctactgaaaagctattctgtaaaaaagcaaagtgtatttactctaattaagaaaaaaa 300
           ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 567 ttcaactgaaaagctattctgtaaaaaagcaaagtgtatttattctaattaagaaaaaaa 508

                                                                       
Query: 301 atacaaattgcatgtgttcttttcctcatttccatggagacttgggtgttaaatattgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atacaaattgcatgtgttcttttcctcatttccatggagacttgggtgttaaatattgct 448

                                                                       
Query: 361 ttcagtttatatcccagcacacaatttcaaaaaggacgaaagtaggatttccactgacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcagtttatatcccagcacacaatttcaaaaaggacgaaagtaggatttccactgacaa 388

                                                                       
Query: 421 cataattgatggatgattgactacttcttgatgtagaagataactttatgtacacaatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cataattgatggatgattgactacttcttgatgtagaagataactttatgtacacaatga 328

                                                                       
Query: 481 gatgcgatttagcgtggatgattgtggaagcttacatttcaaccatcaaagtcaatcatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gatgcgatttagcgtggatgattgtggaagcttacatttcaaccatcaaagtcaatcatt 268

                                                                       
Query: 541 catgtcaagaaggggataatacaagccaggcaaaagttcatatgcaaaatacactggaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catgtcaagaaggggataatacaagccaggcaaaagttcatatgcaaaatacactggaat 208

                  
Query: 601 attaaat 607
           |||||||
Sbjct: 207 attaaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)