Query= MSMg01no390_e05.b1 MSMg01no390_e05.b1 CHROMAT_FILE:
MSMg01no390_e05.b1 PHD_FILE: MSMg01no390_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:07 2005
(380 letters)
>mm_chr12_4414035_4414814
Length = 780
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%)
Strand = Plus / Plus
Query: 1 aaagaagcctgtgccatccatgaagactacagcacagcacagcacaggcctcgcccttcc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaagcctgtgccatccatgaagaccacagcacagcacagcacaggcctcgcccttcc 260
Query: 61 ctcacctatttactcaaatttgtgtccaactctttcctcagtccagacaaaaaaaactta 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcatctatttactcaaatttgtgtccaactctttcctcagtccagacaaaaaaaactta 320
Query: 121 aaggtagcacagtagttgtgtaatgttaatgaagaacatatactctggtaaattttgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtagcacagtagttgtgtaatgttaatgaagaacatatactctggtaaattttgtag 380
Query: 181 ggccttaaatcattctctcaagttttactgatctcactttattggaatcaaacccagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccttaaatcattctctcaagttttactgatctcactttattggaatcaaacccagaaa 440
Query: 241 cacaatttcatcatctcagaacctaaacttctttaaaacattgtcagagacttcagttca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaattccatcatctcagaacctaaacttctttaaaacattgtcagagacttcagttca 500
Query: 301 aaggtattaggaaactttcaattctctttattttcaaaagggaaaattacctcatgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtattaggaaactttcaattctctttattttcaaaagggaaaattacctcatgaaac 560
Query: 361 cttgcattatggggaggtag 380
||||||||||||||||||||
Sbjct: 561 cttgcattatggggaggtag 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_e05.g1 MSMg01no390_e05.g1 CHROMAT_FILE:
MSMg01no390_e05.g1 PHD_FILE: MSMg01no390_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:07 2005
(485 letters)
>mm_chr12_4612404_4613288
Length = 885
Score = 760 bits (393), Expect = 0.0
Identities = 405/409 (99%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 1 aaagatttcctggactacagagtgagttgaagactagcctgcgtaatctaacgtgactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaagatttcctggactacagagtgagttgaagactagcctgcgtaatctaacgtgactat 349
Query: 61 gtctggaacccttgaaagggctggggaaggcgggctgaaaggagcagacttgtcacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtctggaacccttgaaagggctggggaaggcgggctgaaaggagcagacttgtcacactt 289
Query: 121 catggctttgccttgtttcatgctagtaactttttaccatcacaaataacactgtagcac 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 288 catggctttgccttgtttcatgctactaactttttaccatcacaaataacactgtagcac 229
Query: 181 acatctttttctaaaatgttttttaacttttatttttaattacgtgtatgtgtctgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 acatctttttctaaaatgttttttaacttttatttttaattacgtgtatgtgtctgtgcc 169
Query: 241 tatatgtgtgttatgtgcacatgatgtaaatgcactcagaggacagaggcatcagatccc 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tatatgtg-ggtatgtgcacatgatgtaaatgcactcagaggacagaggcatcagatccc 110
Query: 301 ccaaagctggagttacaagtgactgtgagctgcctgagaaacaaactaggacctctggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ccaaagctggagttacaagtgactgtgagctgcctgagaaacaaactaggacctctggaa 50
Query: 361 gagcagtatgtactctcgactgctgaggcacctctccagcccaacaata 409
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 49 gagcagtatgtactctcgactgctgaggcacctctccagtccaacaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
