Query= MSMg01no390_h09.b1 MSMg01no390_h09.b1 CHROMAT_FILE:
MSMg01no390_h09.b1 PHD_FILE: MSMg01no390_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:23 2005
(445 letters)
>mm_chr12_62592646_62593490
Length = 845
Score = 830 bits (429), Expect = 0.0
Identities = 438/441 (99%)
Strand = Plus / Plus
Query: 5 gaattctctctgtaagaaacagggagaactatgtagcttctgcacctgttgagactcaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattctctctgtaagaaacagggagaactatgtagcttctgcacctgttgagtctcaca 264
Query: 65 gaaaacctacaggagacaatacaagcccatgtgagcaaatacaaaagataagaataaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaaacctacaggagacaatacaagcccatgtgagcaaatacaaaagataagaataaagc 324
Query: 125 cttaggtgaccaaagttactgctgttatttcatctcttgtatatcctataaacaatttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttaggtgaccaaagttactgctgttatttcatctcttgtatatcctataaacaatttcc 384
Query: 185 ataatggcaaattgctagccttatcttcaaaattcttagacaatgcacactatctgatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataatggcaaattgctagccttatcttcaaaattcttagacaatgcacactatctgatca 444
Query: 245 tcagtggctattctgaacatacagagtatttaaacaaaatataaaggttatcagttgatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagtggctattctgaacatacagagtatttaaacaaaatataaaggttatcagttgatt 504
Query: 305 ttatggattttgataattcttggctttatggccatacacatgtctatgactttggagaaa 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttatagattttgataattcttggctttatggccatacacatgtctatgactttggagaaa 564
Query: 365 agatttaggctcagcctcgtggcagctcctgcaggggctaatcagaaaggctgctgtgac 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 agatttaggctcagcctcgtggcagctcctgcaggggctaatcagaagggctgctgtgac 624
Query: 425 caaactgaagtggaagttgca 445
|||||||||||||||||||||
Sbjct: 625 caaactgaagtggaagttgca 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h09.g1 MSMg01no390_h09.g1 CHROMAT_FILE:
MSMg01no390_h09.g1 PHD_FILE: MSMg01no390_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:23 2005
(473 letters)
>mm_chr12_62772482_62773351
Length = 870
Score = 864 bits (447), Expect = 0.0
Identities = 466/473 (98%), Gaps = 3/473 (0%)
Strand = Plus / Minus
Query: 1 tctgttgctgtcaaagtttggtggtgcttctgtgctgatgccttatgttaatgagtggcc 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tctgttgctgtc--agtttggtggtgcttctgtgctgatgccttatgttaatgagtggcc 613
Query: 61 ttgtctacccgcctcttccctcaggagtttgacaccatatttctagacctgtttgctaat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 612 ttgtctacccgcctcttccctcaggagtttgacaccatatttctagacatgtttgctaat 553
Query: 121 agcaagatcccatcagtgccttccaaatgcagccaaagatataaaagggatttatttaga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agcaagatcgcatcagtgccttccaaatgcagccaaagatataaaagggatttatttaga 493
Query: 181 aagtaacaaagattcgtctgaaacctattaaatgcaaagcacttaggtaatcagttgcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagtaacaaagattcgtctgaaacctattaaatgcaaagcacttaggtaatcagttgcgt 433
Query: 241 cttagtgaaggtggatttcaagatatgtactgaacacaatgtttttggttggctttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cttagtgaaggtggatttcaagatatgtactgaacacaatgtttttggttggctttattt 373
Query: 301 gagaatattttcaaagtttttttttttaatttcttctttttgtactgagaaatgcataat 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 372 gagaatattttcaaagtttttttttt-aatttcttctttttgtactgagaaatgcataat 314
Query: 361 ttagcatgttcttactctgatcttcatttggtaattactaaatctagtttatacccgctt 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 313 ttagcatgttcttactctgatcttcatttgggaattactaaatctagtttatacccgctt 254
Query: 421 cttatagtaaggtaagctttcccagtcaaggtattcttctattgatgattcat 473
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 253 cttatagtaaggtaagctttcccagtcaagttattcttctattgatgattcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 870
Length adjustment: 10
Effective length of query: 463
Effective length of database: 860
Effective search space: 398180
Effective search space used: 398180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
