Query= MSMg01no390_h11.b1 MSMg01no390_h11.b1 CHROMAT_FILE:
MSMg01no390_h11.b1 PHD_FILE: MSMg01no390_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:23 2005
(171 letters)
>mm_chr12_54843501_54844071
Length = 571
Score = 331 bits (171), Expect = 2e-95
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 cttattataatgagactcaggaacaaataaaatctgtgtgtgtaagatgattaaaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttattataatgagactcaggaacaaataaaatctgtgtgtgtaagatgattaaaaatac 260
Query: 61 catggagacaaaaagagaatagaaaatactggggctggaggtgattgcagttctgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggagacaaaaagagaatagaaaatactggggctggaggtgattgcagttctgaaaca 320
Query: 121 tggattcagatttctcattgggacagtggtatttgaacatagatctgaaga 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggattcagatttctcattgggacagtggtatttgaacatagatctgaaga 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_h11.g1 MSMg01no390_h11.g1 CHROMAT_FILE:
MSMg01no390_h11.g1 PHD_FILE: MSMg01no390_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:23 2005
(461 letters)
>mm_chr12_55014854_55015720
Length = 867
Score = 857 bits (443), Expect = 0.0
Identities = 459/467 (98%), Gaps = 6/467 (1%)
Strand = Plus / Minus
Query: 1 tctctgtctgcctctgttacaaagtttaaaacatgtagcatctacagttttatatgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tctctgtctgcctctgttacaaagtttaaaacatgtagcatctacagttttatatgtgta 608
Query: 61 cagaaaaggtcaacaaacattattttgcattgcggtgacttggtgaaatgctggactgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cagaaaaggtcaacaaacattattttgcattgcggtgacttggtgaaatgctggactgtt 548
Query: 121 tcttgttggaatatttgtagtttttccattttgggagagccggagtttcgtatgtatcct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 547 tcttgttggaatatttgtagtttttccgttttgggagagccggagtttcgtatgtatcct 488
Query: 181 gtattatttctgtggaggaacatccatctttccacgcatcctttagattttgtaggtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtattatttctgtggaggaacatccatctttccacgcatcctttagattttgtaggtgtt 428
Query: 241 ggttttgtgttctgtaggtctttgcaactgctcactgaataaatgaaccaactaccatct 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggttttgtgctctgtaggtctttgcaactgctcactgaataaatgaaccaactaccatct 368
Query: 301 ctgattaaaagattattttttaattatact-aaaaacagtttgaaataaattggtgttag 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 367 ctgattaaaagattattttttaattatactaaaaaacagtttgaaataaattggtgttag 308
Query: 360 catattttatatgcttttta-----cccccccacctctgggaaccaataaacttaggaat 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 307 catattttatatgctttttaccccccccccccacctctgggaaccaataaacttaggaat 248
Query: 415 tttgaaattttaatggcagaaaaatggccatccaaaaatattcttca 461
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttgaaattttaatggcagaaaaatggccatccaaaaatattcttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 867
Length adjustment: 10
Effective length of query: 451
Effective length of database: 857
Effective search space: 386507
Effective search space used: 386507
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
