Query= MSMg01no390_h15.b1 MSMg01no390_h15.b1 CHROMAT_FILE:
MSMg01no390_h15.b1 PHD_FILE: MSMg01no390_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:24 2005
(472 letters)
>mm_chr12_75870795_75871666
Length = 872
Score = 847 bits (438), Expect = 0.0
Identities = 465/474 (98%), Gaps = 3/474 (0%)
Strand = Plus / Plus
Query: 1 aaagttcttcaacttttaaaggataatacagggaaagatgctcattttttt-ctaatata 59
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 200 aaagttcttcaacttttaaaggataatacagggaaagatgctcattttttttctaatata 259
Query: 60 gttatcaatttaaataaagtggataatagccttcaatttgttagaaatccataccaaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttatcaatttaaataaagtggataatagccttcaatttgttagaaatccataccaaaag 319
Query: 120 aaacacagcatatgaaaagctcctcacatctactaaagaaatagaatttataactttaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaacacagcatatgaaaagctcctcacatctactaaagaaatagaatttataactttaaa 379
Query: 180 accaaataataaaaattgaagcacacatagttttaatgatgaattctactgtgtgtatgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 accaaataataaaaattgaagcacacatagttttaatgatgaattctactgtgtgtaggg 439
Query: 240 taaataatgcctattctttattgggagacacaagccatttctactagtttata-atgcca 298
||||||||||| | || ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 440 taaataatgccaactcaatattgggagacacaagccatttctactagtttataga-gcca 498
Query: 299 agctccatcctgatatcatccccacacaaattcacacagcccctgacttcctatggttta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agctccatcctgatatcatccccacacaaattcacacagcccctgacttcctatggttta 558
Query: 359 gagagggatttttgagttcataatggttttatccaaaatgcatagagactgtaactcaat 418
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gacagggatttttgagttcataatggttttatccaaaatgcatagagactgtaactcaat 618
Query: 419 aaaaggacaactaaataaacaatgggtcagcaaagggttttctgttttaagcta 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaaggacaactaaataaacaatgggtcagcaaagggttttctgttttaagcta 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h15.g1 MSMg01no390_h15.g1 CHROMAT_FILE:
MSMg01no390_h15.g1 PHD_FILE: MSMg01no390_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:24 2005
(481 letters)
>mm_chr12_76036170_76037050
Length = 881
Score = 884 bits (457), Expect = 0.0
Identities = 472/477 (98%)
Strand = Plus / Minus
Query: 5 tgtttaagtgacttctacttaaaaataagacatgtctgaaaattaacagattaagtttag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtttaagtgacttctacttaaaaataagacatgtctgaaaattaacagattaagtttag 622
Query: 65 ttaactaagtagtagaagccagaaatgagactattagaggcttcccatgagttcttcatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaactaagtagtagaagccagaaatgagactattagaggcttcccatgagttcttcatt 562
Query: 125 ttaaattgctgcacagagctaatcattttgtattgctctgaagagacgacagggaaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaattgctgcacagagctaatcattttgtattgctctgaagagacgacagggaaattt 502
Query: 185 ttcctgttagtagatattaatttcatcctgactgctaccctacgtggctccttggcacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcctgttagtagatattaatttcatcctgactgctaccctacgtggctccttggcacta 442
Query: 245 tacaatctgctcctgaaagctgaattgacagcatcatttctactccataagaaacatact 304
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaatctgcacctgaaagctgaattgacagcatcatttctactccataagaaacatact 382
Query: 305 atgtgtaacttgaaatatatgagtggaaacataaatgtataataaatgaaggaaaaagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtaacttgaaatatatgagtggaaacataaatgtataataaatgaaggaaaaagat 322
Query: 365 gagaatgaggttagaaataccaagatactatccatttcgagttatgtccctttcaaagtc 424
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggatgaggttagaaatacaaagatactatccatttcgagttatgtccctttcaaagtc 262
Query: 425 atgtctttctaggaacagctttcacaagtcaggagggcttttctaaggacatggaag 481
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctttctaggaaccgctttcacaagtcaggagggcttttctaaggacatggaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
