Query= MSMg01no390_p14.b1 MSMg01no390_p14.b1 CHROMAT_FILE:
MSMg01no390_p14.b1 PHD_FILE: MSMg01no390_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:03 2005
(229 letters)
>mm_chr12_5293466_5294094
Length = 629
Score = 412 bits (213), Expect = e-120
Identities = 225/229 (98%)
Strand = Plus / Minus
Query: 1 atcccagttccttctgtcttcaaaaccttgtatgtcacctagactagaaatagtttctct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 429 atcccagttccttctgtcttcaaaaccttgtttgtcacctagactagaaatagtttctct 370
Query: 61 gcagaccccagagtttgtttttgtgtcaaagtttgactttctaagtggccttccttagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcagaccccagagtttgtttttgtgtcaaagtttgactttctaagtggccttccttagct 310
Query: 121 tgtaggcatcctcactggtagccaagactgctgggaaccgttgtttatttgtcatctttg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 309 tgtaggcatcctcactggtagccaagactgctgggaaccgttgggaatttgtcatctttg 250
Query: 181 tgacgatagccggggggtaaagcacagaggttagcctcagcctggactc 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgacgatagccggggggtaaagcacagaggttagcctcagcctggactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_p14.g1 MSMg01no390_p14.g1 CHROMAT_FILE:
MSMg01no390_p14.g1 PHD_FILE: MSMg01no390_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:03 2005
(231 letters)
>mm_chr12_5115374_5116004
Length = 631
Score = 377 bits (195), Expect = e-109
Identities = 222/231 (96%)
Strand = Plus / Plus
Query: 1 atgctgcatgtgtgctgacaccgtggggacaaatgatagctttgcacaaacagcctcccc 60
|||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atgctggatatgtgctgacaccgtggggacaaatgagagctttgcacaaacagcctcccc 260
Query: 61 attggacgctttgtacagccacaccatccatgaggtgcccagagcctgcttccctgacag 120
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 261 attggacgctttgtacagccacaccatccatgaggtgcccagagccagctcccctgacag 320
Query: 121 gattgctcaggacttatcagtctgtgcctggagagggtctgactgggacagcttgatgtc 180
|||||||||||| ||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 321 gattgctcaggaattatcagtctgtgcctggagagggtctgactggaaaaacttgatgtc 380
Query: 181 attgctgagtcactgcagtctgctaccacgaggaccctttcctcctcggag 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgctgagtcactgcagtctgctaccacgaggaccctttcctcctcggag 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
