Query= MSMg01no391_a10.b1 MSMg01no391_a10.b1 CHROMAT_FILE:
MSMg01no391_a10.b1 PHD_FILE: MSMg01no391_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:06 2005
(455 letters)
>mm_chr12_95995080_95995933
Length = 854
Score = 861 bits (445), Expect = 0.0
Identities = 448/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 3 ggaattcagcaatactaaatacctaagttacatgtataaattcgagggcatgcttctgaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ggaattcagcaatactaaatacctaagttacatgtataaattcgagggcatgcttctgaa 591
Query: 63 acctagcctctaaaacagtacattgctgtgtgattgtatccctaggtacctgaagataga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 acctagcctctaaaacagtacattgctgtgtgattgtatccctaggtacctgaagataga 531
Query: 123 caaaatctgttcacaggaaacttaattagtacagtcactctccagggataaaacaaatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 caaaatctgttcacaggaaacttaattagtacagtcactctccagggataaaacaaatat 471
Query: 183 agctagggtcaaccagagacagaggaatagaaaatttctgaaatttcatatttttagaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agctagggtcaaccagagacagaggaatagaaaatttctgaaatttcatatttttagaat 411
Query: 243 agtgctgattataaagatgtgtatattttaatcatgtactcaaattataaacttattaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agtgctgattataaagatgtgtatattttaatcatgtactcaaattataaacttattaag 351
Query: 303 tattccttccccatacttttccttggctgacaagataaataaataaaatgtataagtttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tattccttccccatacttttccttggctgacaagataaataaataaaatgtataagtttt 291
Query: 363 gtcctatataagtaactttaatttgattatttaagtaattgtataactttcctaaaattt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtcctatataagtaactttaatttgattatttaagtaattgtataactttcctaaaattt 231
Query: 423 ttaacttttcttcttttttttggggggga 451
|||||||||||||||||||| ||||||||
Sbjct: 230 ttaacttttcttcttttttt-ggggggga 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_a10.g1 MSMg01no391_a10.g1 CHROMAT_FILE:
MSMg01no391_a10.g1 PHD_FILE: MSMg01no391_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:07 2005
(238 letters)
>mm_chr12_95825252_95825888
Length = 637
Score = 395 bits (204), Expect = e-114
Identities = 228/236 (96%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 1 cctacaaccagggacttaaaatatctattgttgagttcttgtcatttcctgacatttttt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctataaccagggacttaaaatatctattgttgagttcttgtcatttcctgacatttttt 260
Query: 61 tcttttgatatttttctaagcttgaggttcacgaaaaggtgaacattaatcacaacattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttttgatatttttctaagcttgaggttcacgaaaaggtgaacattaatcacaacattt 320
Query: 121 gagaaaaatcccttagctcgttatgtgtgatgaatatgttaaaaacaggcttaagccagg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaaaaatcccttagcttgttatgtgtgatgaatatgttaaaaacaggcttaagccagg 380
Query: 181 gccaaaccatgtta-tgtttgactttttagttaatcacgcataactgctaaaatca 235
|||||| |||||| | |||||||||||||||||||| | ||||||||||||||||
Sbjct: 381 gccaaaaaatgttact-tttgactttttagttaatcatg-ataactgctaaaatca 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 637
Length adjustment: 9
Effective length of query: 229
Effective length of database: 628
Effective search space: 143812
Effective search space used: 143812
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
