Query= MSMg01no391_l10.b1 MSMg01no391_l10.b1 CHROMAT_FILE:
MSMg01no391_l10.b1 PHD_FILE: MSMg01no391_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:01 2005
(459 letters)
>mm_chr12_6312641_6313499
Length = 859
Score = 822 bits (425), Expect = 0.0
Identities = 449/457 (98%)
Strand = Plus / Plus
Query: 3 ggaattctcaacctttctaatgctgcaaccctttgatgcagttccttatgttgtggtgac 62
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctcaaccttcctaatgctgcaaccctttgatgcagttccttatgttgtggtgac 262
Query: 63 ctccatgcataaagatattttcattgctacttcataactgtaattttgctactgtcatga 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctccatgcataaaaatattttcattgctacttcataactgtaattttgctactgtcatga 322
Query: 123 atcataatgtaaatatatatgtttttgactgttttgggtggcccctgtgagagggtcatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atcataatgtaaatatatatgtttttgactgttttgggtggcccctgtgagagggtcatt 382
Query: 183 gacaccgctcccccaaagtgattgcaacccacaagttgagaacaactattttaaaagttc 242
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gacaacgctcccccaaagtgattgcaacccacaagttgagaacaactattttaaaagttc 442
Query: 243 catttctagtaatgcatacaataagccaaagaattactcaaaatatgatttataaattgt 302
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 443 catttctagtaatgcatacaataagccaaagaattacacaaaatgtgatttataaagtgt 502
Query: 303 accatgtagagatggttgacatagcccctgacaatgacaagtcttgtaacccactcacaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 503 accatgtagagatggttgacatagcccctgacaatgacaagtcttgtaacccattcacaa 562
Query: 363 atcctcaggactgggagtcttagttttctctccagagaatagagatggtaatagaaattt 422
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcctcaggactaggagtcttagttttctctccagagaatagagatggtaatagaaattt 622
Query: 423 agaaaattatccttacaagtctagaaaaacatatcaa 459
|||||||||||||||||||||||||||||||||||||
Sbjct: 623 agaaaattatccttacaagtctagaaaaacatatcaa 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_l10.g1 MSMg01no391_l10.g1 CHROMAT_FILE:
MSMg01no391_l10.g1 PHD_FILE: MSMg01no391_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:01 2005
(446 letters)
>mm_chr12_6450151_6451003
Length = 853
Score = 804 bits (416), Expect = 0.0
Identities = 439/450 (97%), Gaps = 7/450 (1%)
Strand = Plus / Minus
Query: 1 acccacagtgaactatcgtcatgcctagttccctcaaactttcaaactatagataagccc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 650 acccacagtgaactatcgtcatgcctggttccctcaaactttcaaactatagataagccc 591
Query: 61 taccttgaaatctgaaaattccccacacaatataattagataaacaaataattattaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 taccttgaaatctgaaaattccccacacaatataattagataaacaaataattattaaag 531
Query: 121 aagagcaaaatgcttcataaatttacctagttaatgttagcctgaattggtcttcaacca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aagaacaaaatgcttcataaatttacctagttaatgttagcctgaattggtcttcaacca 471
Query: 181 ggaagcttttcccagtgggtggctagaagggaatcttccctgtgttttggatgacatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggaagcttttcccagtgggtggctagaagggaatcttccctgtgttttggatgacatggt 411
Query: 241 attctattagatgcttaaagctattctggtgtgctggc---aaaaaaaaaaaaaaaaaag 297
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 410 aatctattagatgcttaaagctattctggtgtgctggcaaaaaaaaaaaaaaaaaaaaag 351
Query: 298 actacacatcatgtgaaagatgggagatgcaatgagtgataatgacctaaggcggctctt 357
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 350 actacacatcatgtgaaagatgggagatgcaatgagtgataacgacctaaggcggctctt 291
Query: 358 ctcatgctccatcctcacattcaatttggggatctttctggattt----aaaaaaaaaaa 413
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 290 ctcatgctccatcctcacattcaatttggggatctttctggatttaaaaaaaaaaaaaaa 231
Query: 414 aaaggctattatgtcccggagacaacactg 443
||||||||||||||||||||||||||||||
Sbjct: 230 aaaggctattatgtcccggagacaacactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 853
Length adjustment: 10
Effective length of query: 436
Effective length of database: 843
Effective search space: 367548
Effective search space used: 367548
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
