Query= MSMg01no394_a15.b1 MSMg01no394_a15.b1 CHROMAT_FILE:
MSMg01no394_a15.b1 PHD_FILE: MSMg01no394_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:16 2005
(546 letters)
>mm_chr12_96733490_96734435
Length = 946
Score = 1002 bits (518), Expect = 0.0
Identities = 536/542 (98%)
Strand = Plus / Minus
Query: 5 gaattcctcttgatttcgacagataaacactgtcctctctatttgtaaaattatctgtga 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaattcctcttgagctagacagataaacactgtcctctctatttgtaaaattatctgtga 687
Query: 65 aagaactgaaaatcagacataaatgggagaaaatttccctcaaactctccaagttgtagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aagaactgaaaatcagacataaatgggagaaaatttccctcaaactctccaagttgtagt 627
Query: 125 agtcttgaagtcctattggattaagttctacagaaatgactttcacagaatgcccactag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agtcttgaagtcctattggattaagttctacagaaatgactttcacagaatgcccactag 567
Query: 185 acttgttcccacaggctgtctgaccatctgtagtattaaagaatttccattacatatgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acttgttcccacaggctgtctgaccatctgtagtattaaagaatttccattacatatgtc 507
Query: 245 ctgtggctattgttttagaattgattagagagtgtttgtgatgtattatccaaactgaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctgtggctattgttttagaattgattagagagtgtttgtgatgtattatccaaactgaaa 447
Query: 305 taattgacttcaattcccccatcagaaaagtacaaagcaaaccagggaaaatacccagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taattgacttcaattcccccatcagaaaagtacaaagcaaaccagggaaaatacccagtt 387
Query: 365 cccttgctaaaagtgaacaaacaatatgctatacttttgactttccagttgagtataaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cccttgctaaaagtgaacaaacaatatgctatacttttgactttccagttgagtataaga 327
Query: 425 acacacagtgttacatttacttgagacagaacgatgctaatatttttcaaccaaattgtg 484
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 326 acacacagtgttacatttacttgaaacagaactatgctaatatttttcaaccaaattgtt 267
Query: 485 tccacagaaaattgatgcataatatcatttacttgagataccagtttctctttagtttat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccacagaaaattgatgcataatatcatttacttgagataccagtttctctttagtttat 207
Query: 545 ct 546
||
Sbjct: 206 ct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_a15.g1 MSMg01no394_a15.g1 CHROMAT_FILE:
MSMg01no394_a15.g1 PHD_FILE: MSMg01no394_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:16 2005
(459 letters)
>mm_chr12_96573588_96574446
Length = 859
Score = 843 bits (436), Expect = 0.0
Identities = 454/460 (98%), Gaps = 2/460 (0%)
Strand = Plus / Plus
Query: 1 ccctgtcctggggcatatgatcttcgcaagaccaagggtctctcccactgatggctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctgtcctggggcatatgatcttcgcaagaccaagggtctctcccactgatggctgact 260
Query: 61 aggccatcctctgctacatatgcaactagagacacagatctgggggggactggttagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggccatcctctgctacatatgcaactagagacacagatctgggggggactggttagttc 320
Query: 121 atattgttgttct-ccctaatgcatgagctagagaaagtactcatggagttaaaggggtc 179
||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 atattgttgtt-taccctaatgcatgagctagagaaagtacccatggagttaaaggggtc 379
Query: 180 tgcaactctatagattgaggactcttaaccaagccattctggccaaaagtggtatggctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgcaactctatagattgaggactcttaaccaagccattctggccaaaagtggtatggctt 439
Query: 240 gcctcccactgagaagctatggtcaaactgaaaggagccactgaatatgagtaacattcc 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 gcctcccactgagaagctatggtcaaacagaaaggagccactgaatatgagtaacattcc 499
Query: 300 tttagtagagtcagggggtgccatctaagatcctgcaatgcaaaggagagcccctcccag 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 500 tttagtagagtcagggggtgccatctaagatcctgcaatgcaaaggagaggccctcccag 559
Query: 360 cacagactaactatttggctttcagcatggtacaaaatggacagacttgtgaatagtttt 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacagacttactatttggctttcagcatggtacaaaatggacagacttgtgaatagtttt 619
Query: 420 attttatatgtgagtgtatggaatctccctgatgtcaagt 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attttatatgtgagtgtatggaatctccctgatgtcaagt 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
