Query= MSMg01no394_a17.b1 MSMg01no394_a17.b1 CHROMAT_FILE:
MSMg01no394_a17.b1 PHD_FILE: MSMg01no394_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:16 2005
(459 letters)
>mm_chr12_76324832_76325689
Length = 858
Score = 841 bits (435), Expect = 0.0
Identities = 450/455 (98%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcccagggcatccacagtcaagtgcagctgagacacactctgagatcaggagg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcccaggg-atccacagtcaagtgcagctgagacacactctgagatcaggagg 263
Query: 65 tggccatctggacagatcccgctatggatggccttgcctttctggctggggactgctgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggccatctggacagatcccgctatggatggccttgcctttctggctggggactgctgga 323
Query: 125 tctcaggcagggtgatgggggaggggaggctctctgctattcttgtcactctgtggcagt 184
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 324 tctcaggcagggtgatgggggaggggaagctctttgctattcttgtcactctgtggcagt 383
Query: 185 tctgggacagagaatgaacctcttcctttttctttgatttctacccaaaatgtaagaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgggacagagaatgaacctcttcctttttctttgatttctacccaaaatgtaagaaat 443
Query: 245 aaagatagctataatttggaactgaaatgtctcccaaaggcccaatgttaaaggcttaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagatagctataatttggaactgaaatgtctcccaaaggcccaatgttaaaggcttaat 503
Query: 305 tcccaacttggccctattaagatctggcagaaagagatagggtcttgttagaggttttag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcccaacttggccctattaagatctggcagaaagagatagggtcttgttagaggttttag 563
Query: 365 gttaatgtgggcagcgctggaagggtctgttagagccaagtctttcccattttctcttta 424
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttaatgtgggtagtgctggaagggtctgttagagccaagtctttcccattttctcttta 623
Query: 425 tttgatctctctgctgtgaatagctttgttccagt 459
|||||||||||||||||||||||||||||||||||
Sbjct: 624 tttgatctctctgctgtgaatagctttgttccagt 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space: 380752
Effective search space used: 380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_a17.g1 MSMg01no394_a17.g1 CHROMAT_FILE:
MSMg01no394_a17.g1 PHD_FILE: MSMg01no394_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:17 2005
(431 letters)
>mm_chr12_76516041_76516877
Length = 837
Score = 774 bits (400), Expect = 0.0
Identities = 426/438 (97%), Gaps = 8/438 (1%)
Strand = Plus / Minus
Query: 1 actttcatggccaagaagccaggctgcaggggacttcggatcaccacagatgcctgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 actttcatggccaagaagccaggctgcaggggacttcggatcaccacagatgcctgctgg 578
Query: 61 ggccgctgcgagacctgggaggtgagtagt------ggcttgggtggcagtgtcctcggg 114
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 577 ggccgctgcgagacctgggaggtgagtagtccaaggggcttgggtggcagtgtcctcggg 518
Query: 115 gacagggccttgatttcaagctcacagtttcacgatggaggggaagctggcatacctgcc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gacagggccttgatttcaagctcacagtttcacgatggaggggaagctggcatacctgcc 458
Query: 175 ctgccctctgggctctaaaaagctgatcacacaattatttggcttcttccatatggtctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ctgccctctgggctctaaaaagctgatcacacaattatttggcttcttccatatggtctg 398
Query: 235 aaaaccatgatga-ggctttcttccagaggactgttgaggttggtaatgtaatttccatg 293
||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaaaccatgatgatgg-ttttttccagaggactgttgaggttggtaatgtaatttccatg 339
Query: 294 gttctgtttgggagccatccctaggagggtgggtgctactatttacccagtgtagagatc 353
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 338 gttctgtttgggagccatccctaggagggtgggtgctactatttacccattgtagagatc 279
Query: 354 acagggaaggagtcgagagggaatggcttcgaagtcagagagagtcagtacaaagttgga 413
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 278 acaggaaaggagtcgagagggaatggcttcgaagtcagagagagtcagtgcaaagttgga 219
Query: 414 aatgaattcttggtccaa 431
||||||||||||||||||
Sbjct: 218 aatgaattcttggtccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 837
Length adjustment: 9
Effective length of query: 422
Effective length of database: 828
Effective search space: 349416
Effective search space used: 349416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
