Query= MSMg01no394_e07.b1 MSMg01no394_e07.b1 CHROMAT_FILE:
MSMg01no394_e07.b1 PHD_FILE: MSMg01no394_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:35 2005
(466 letters)
>mm_chr12_90261595_90262460
Length = 866
Score = 847 bits (438), Expect = 0.0
Identities = 456/462 (98%)
Strand = Plus / Plus
Query: 5 gaattcccatagtccgaactgaaatccaagtaagaaaaggcgccaggcatagagaaaata 64
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcccatagaaggaactgaaatccaagtaagaaaaggtgccaggcatagagaaaata 264
Query: 65 tcccagacctagagggaaaggcaaggacaggaagatcccaggcttggcatatccagaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcccagacctagagggaaaggcaaggacaggaagatcccaggcttggcatatccagaaat 324
Query: 125 agaatgaagagtggtatctctttataaaccaagggcaactgggaacttagaataattaag 184
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 325 agaatgaagagtggtatctctttataaaccaggggcgactgggaacttagaataattaag 384
Query: 185 aaccaaaataaccttcatgcatagatatgactttgaagaaaacatatttaactcttgaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaccaaaataaccttcatgcatagatatgactttgaagaaaacatatttaactcttgaaa 444
Query: 245 aactatttttcttgccatttaaatattggctagttttcacattagagacaggtgtaacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aactatttttcttgccatttaaatattggctagttttcacattagagacaggtgtaacat 504
Query: 305 ttattctattgatctgtgatatgaatttcctcctgtaatttgttctcatttcctcagaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttattctattgatctgtgatatgaatttcctcctgtaatttgttctcatttcctcagaac 564
Query: 365 cccagagaaaatccaaaatgcagagcaagtgttattatattaaaattttattagatagta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccagagaaaatccaaaatgcagagcaagtgttattatattaaaattttattagatagta 624
Query: 425 taattaaacaaaatactgtatgggaatatgcccatcattaaa 466
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taattaaacaaaatactgtatgggaatatgcccatcattaaa 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_e07.g1 MSMg01no394_e07.g1 CHROMAT_FILE:
MSMg01no394_e07.g1 PHD_FILE: MSMg01no394_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:36 2005
(454 letters)
>mm_chr12_90440434_90441287
Length = 854
Score = 731 bits (378), Expect = 0.0
Identities = 437/458 (95%), Gaps = 8/458 (1%)
Strand = Plus / Minus
Query: 1 acctaagctttggttgaaaagtatgtaaaagg-tacgc--aaaaagtgcattgcatcctg 57
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||
Sbjct: 654 acctaagctttggttgaaaagtatgt-aaaggatacgcaaaaaaagtgcattgcatcttg 596
Query: 58 tattcacacgtttgatacatattcactctgtgtgctcacttggtaattacag-ttgagaa 116
||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||
Sbjct: 595 tattcacacgtttgatacacattcactctgtgtgctcacttggtactt--agtttgagaa 538
Query: 117 tgtagctgctgtggttgtgatggttttggagttgataccttcataagaccagggagaagc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 537 tgtagctgctgtggttgtgatggttttggagttgataccttcataagaccagggaaaagc 478
Query: 177 aaacagttatgaatgacagttatagaaagaggtgagagcagtgattaggacctcaactct 236
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 477 aaacagttatgaatgaccgttatagaaagaggtgacagcagtgattaggacctcaactct 418
Query: 237 gaccataagggcaagccaatgatcttcatgggctgtgcatagttcaattgtcttggaaag 296
||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 417 gaccatatgggcaagccagtgatcttcatgggctgtgcatag-tcaattgtcttggaaag 359
Query: 297 tgctgagaaaagtcttcaaatgaaccagccaggtcaaatcaactagaatttattttttct 356
| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 358 tactgagaaaagtcttcacatggaccagccaggtcaaatcaactagaatttattttttct 299
Query: 357 tttcagggagctcatttactgctatgaagctccctagaaaatacaatcagctcatttgac 416
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 298 tttcagggagctcatttactgctatgaaactccttagaaaatacaatcagctcatttgac 239
Query: 417 attgaagtcaaattcacttggatatcaagtctatttag 454
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attgaagtcaaattcacttggatatcaagtctatttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
