Query= MSMg01no394_n24.b1 MSMg01no394_n24.b1 CHROMAT_FILE:
MSMg01no394_n24.b1 PHD_FILE: MSMg01no394_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:25 2005
(437 letters)
>mm_chr12_43267885_43268720
Length = 836
Score = 818 bits (423), Expect = 0.0
Identities = 429/431 (99%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 7 gaattctctatgttgtctttccattaatcctttattacctatgcaatttacaaatataca 66
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattctctatgtagtctttccattaatcctttattacctatgcaatttacaaatataca 471
Query: 67 ctcctattccatgggctatactcttgttggatattgatgcacaaaactttttaattctgt 126
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 470 ctcctattccatgggctatactcttgttggatattgatgcac-aaactttttaattctgt 412
Query: 127 gaagtctagcatatttattcttttggggaaggcattgttcttggtttattcatggtttcc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaagtctagcatatttattcttttggggaaggcattgttcttggtttattcatggtttcc 352
Query: 187 tgtgcctattctcagtttgactctcaaatccaatgccataagtactttatgctgtgtttt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgtgcctattctcagtttgactctcaaatccaatgccataagtactttatgctgtgtttt 292
Query: 247 atcagggttagttttaggagttaaatttagatcattgaatctattgtgaactacttttct 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atcagggttagttttaggagttaaatttagatcattgaatctattgtgaactacttttct 232
Query: 307 ttttgtatcctgtgtattttattttgcttccatttgctgggataaaactccatgagcaaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttttgtatcctgtgtattttattttgcttccatttgctgggataaaactccatgagcaaa 172
Query: 367 agcaacttaggccatcctctgctacatatgcagctagagccatgagttctaccatgtgtt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agcaacttaggccatcctctgctacatatgcagctagagccatgagttctaccatgtgtt 112
Query: 427 ttctttggttg 437
|||||||||||
Sbjct: 111 ttctttggttg 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 836
Length adjustment: 9
Effective length of query: 428
Effective length of database: 827
Effective search space: 353956
Effective search space used: 353956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_n24.g1 MSMg01no394_n24.g1 CHROMAT_FILE:
MSMg01no394_n24.g1 PHD_FILE: MSMg01no394_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:25 2005
(439 letters)
>mm_chr12_43099087_43099925
Length = 839
Score = 835 bits (432), Expect = 0.0
Identities = 437/439 (99%)
Strand = Plus / Plus
Query: 1 tcctctggagaactactactgtgtgagctggtcacgtggtcagctaaacacaaaaccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctctggagaactactactgtgtgagctggtcacgtggtcagctaaacacaaaaccatg 260
Query: 61 accatggtcagggcatggttgaagcagaggtcacactgaaccttacaacttgacagtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatggtcagggcatggttgaagcagaggtcacactgaaccttacaacttgacagtcca 320
Query: 121 tggcattctccctcataactgcagcctgatgaatgcctgcaaataaacctgtgtccatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcattctccctcataactgcagcctgatgaatgcctgcaaataaacctgtgtccatcc 380
Query: 181 agtgttaaaagccccccattttaacttatttgctatgcctaacagcatttatataatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgttaaaagccccccattttaacttatttgctatgcctaacagcatttatataatctc 440
Query: 241 tcaaagctgattttattttttaataactgaaacataaaatgaataagagatatgtttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaagctgattttattttttaataactgaaacataaaatgaataagagatatgtttttc 500
Query: 301 cacatcacattatattttcatcagaaaccactgggaatgtgtaaaacaatgtaatggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatcacattatattttcatcagaaaccactgggaatgtgtaaaacaatgtaatggcaa 560
Query: 361 agtaattatcacctctgatatttttattatgctcaattaaatattctactacataatana 420
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 agtaattattacctctgatatttttattatgctcaattaaatattctactacataataaa 620
Query: 421 tatatataattggtaggac 439
|||||||||||||||||||
Sbjct: 621 tatatataattggtaggac 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
