Query= MSMg01no395_l15.b1 MSMg01no395_l15.b1 CHROMAT_FILE:
MSMg01no395_l15.b1 PHD_FILE: MSMg01no395_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:39 2005
(422 letters)
>mm_chr12_37773450_37774271
Length = 822
Score = 723 bits (374), Expect = 0.0
Identities = 402/422 (95%), Gaps = 18/422 (4%)
Strand = Plus / Minus
Query: 1 gaaactgaaggaccttaggaatggaaaatgctcagccccagcttcctccaaacttttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaaactgaaggaccttaggaatggaaaatgctcagccccagcttcctccaaacttttagt 363
Query: 61 gcgaccagagcaaggaacggctgaaaaagtccctgcaaagctcacagacaagggaataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcgaccagagcaaggaacggctgaaaaagtccctgcaaagctcacagacaagggaataac 303
Query: 121 taactaatatatgaattccatgatcatgatgagaatttattcagatcagaaatgtgttcc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taactaatatatgaatcccatgatcatgatgagaatttattcagatcagaaatgtgttcc 243
Query: 181 ataaattacaggaataaagcaaaagaatacagtgaagttaagataaaatattttattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataaattacaggaataaagcaaaagaatacagtgaagttaagataaaatattttattttt 183
Query: 241 aaaaattatttattttacatgaacattctctctctctctctctctctctctctctct--- 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaaattatttattttacatgaacattctctctctctctctctctctctctctctctttc 123
Query: 298 -------------ctctctctctgtgtgtgtgtgtgtgtgt--attcaggaaagattttt 342
|||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 122 tctttctctctctctctctctctgtgtgtgtgtgtgtgtgtgtattcgggaaagattttt 63
Query: 343 accaactacacatgggctaagcatctaatgtccaaattaaatgctcaaggaacatgtata 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 accaactacacatgggctaagcatctaatgtccaaattaaatgctcaaggaacatgtata 3
Query: 403 aa 404
||
Sbjct: 2 aa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_l15.g1 MSMg01no395_l15.g1 CHROMAT_FILE:
MSMg01no395_l15.g1 PHD_FILE: MSMg01no395_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:40 2005
(342 letters)
>mm_chr12_37649699_37650439
Length = 741
Score = 563 bits (291), Expect = e-165
Identities = 324/335 (96%), Gaps = 3/335 (0%)
Strand = Plus / Plus
Query: 4 actcctgagcagcactggttgaagctaatgggaacccagaaaagagagatttatggataa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 actcctgagcagcactggttgaagctaatgggaacccagaaaagagagatttatggataa 263
Query: 64 attatgagcgtaaagtgtgcctttctctggctgatgact-tcctgaagatctatgaatcg 122
|||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 264 attatgagagtaaagtgtgcctttctctggctgatga-tgtcctgaagatctatgaatcg 322
Query: 123 ttaaacaacttctctcagcaaactcctgggaaacagcagaaagtggcagtgtctgtgtgt 182
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 323 ttaaacaacttctctcagcaaactcctgggaaacagcagaaagtggcattgtctgtgtgt 382
Query: 183 gtagaaacctttatcaatcaagaaaaataatacaaaaacacaaggaaaacaaagataagg 242
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 383 atagaaacctttatcaatcaagaaaaataatacaaaaatacaaggaaaacaaagataagg 442
Query: 243 aatattaggaatgagatgaataaggatacagagtgaggagggagagctggggagaaagag 302
|| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 443 aagaacaggaatgagatgaataaggatacagagtaaggagggagagctggggagaaagag 502
Query: 303 acagacagacagacacagaaagagactcgtgtgtg 337
|||||||||||||||||||||||||||| ||||||
Sbjct: 503 acagacagacagacacagaaagagactc-tgtgtg 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
