XXXXXXXXXXXXXXXXXXXXXXXXTTTCCGAGGATCCGCGGAATTCATAG
CATTTTCATACACAAAGAACCTAAGTCCTGTGGGCTCATCCCTTTGAATG
ACAGCTGTCAATCACTCAGGGTGTCCCAAAGACCAATGGAAGGCTGTTGG
GGAGAAAGGTTTCAGATGGTTTGTGATAATTTTACACAAGGGATATTTAA
TGTATTCTGTATAGGGCCCAGTCACCTGGAGTAAGGTTCTGTCCTGCTTA
CGACCCAGACGCACGCTCTTTCAATGAGGGTGGCACAGGAGCTTCAGAGG
GACAGCGGCAGTGTATGCCACTCACATTAACCGTGTGCCCAGGGCGCTCT
CAACCACCTGACACCTGTTACTCCATAACTCTCCCAGTCTGGCTGGTGTG
GAGTGTCAGGACAAAGAAATTAGGACTCAGAGGAGCTAACAGACTCACGC
GGGACCAATGAAAGCCACATCAAACCTGTCGCTGCACCCTCACCCCCAAA
ACACACTGTGACAAATACCACGGTCGGGCAGCTGCCTCCATACGCACTGT
ACACCACATTTTAAATCATGTTGTAAGCAATGGACAGTTCCACCACCCTG
TTCTGATATGAAGTGTGTATACACACACACTCTTACACATTCTCTTACAT
TTTTTCCCTCCCCCTCTTACCTCTTTGACAATTTCTTTCATTATCCATCT
CCTTGTCCCCTGCCCCTTTTCCCAACGCCCAGTGCTTTGTTTTGTTTATA
CTTCCCCCCCG

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAACGGCTGTCACTTATCTATATCCAGTGTCCCCAGC
TTATGAAAGAACAGAACTTTACATCAGGAGGGAGGGACAGATGGAGTCCT
GGGGATTTCTAACCAAGAGGGCAGTGGACATTTGTAATCCTAGAATTTGG
AGAGAGATACAGGAGGATCAGGAGTTTAAGGCTAGCCTGGGTTACATGAA
GTTCTGTTGCAACAAAACAAAGCACAAGGCAGGATAAAAAAAAAAAAGAG
AGTCGAGGTTCTTTTCTCTTGTAACATTGATGAAATGGCATTTTTGTAAG
AGAAAAGACAGAAAGTTCAGTTAGAAGAAAGCTATTAAAGTCCTGAATAG
AACAGCCATGGCTTGTGCTGTAAGATCGAGAATCGATAAATGGGACCTCA
TAAAATTGCACAGCTTCTGCAAAGCACAAGACACTGTCAATAATACAAAA
AGACCACCAGCAGATTGGGAAAGGATCTTTACCTATCCCAAATTGGATAG
GGGACTAATATCCAATATATATATAGAACTCTAGAAGGAGGATTCCAGAT
AATCCAATAGCCCCATTAAAAAATGGGGCTCAGAGCTGACCAAAGAATTC
TCACCTGAGGAATACTGAATGGCTCTAAAGTACCTGAAAAAATGTTCCCC
ATCCTTAGTCATCCGGGGAATGCCCATCTTTACACCCCTGATATTCCCTT
T

Query= MSMg01no396_c09.b1 MSMg01no396_c09.b1 CHROMAT_FILE:
MSMg01no396_c09.b1 PHD_FILE: MSMg01no396_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:12 2005
         (489 letters)



>mm_chr12_100591589_100592476
          Length = 888

 Score =  847 bits (438), Expect = 0.0
 Identities = 471/482 (97%), Gaps = 1/482 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattcatagcattttcatacacaaagaacctaagtcctgtgggctcatccctttgaatg 67
           ||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatagcaacctgatacacaaagaacctaagtcctgtgggctcatccctttgaatg 267

                                                                       
Query: 68  acagctgtcaatcactcagggtgtcccaaagaccaatggaaggctgttggggagaaaggt 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acagctgtcaatcactcagggtgtcccaaagaccaatggaaggctgttggggagaaaggt 327

                                                                       
Query: 128 ttcagatggtttgtgataattttacacaagggatatttaatgtattctgtatagggccca 187
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttcagatggtttgtggtaattttacacaagggatatttaatgtattctgtatagggccca 387

                                                                       
Query: 188 gtcacctggagtaaggttctgtcctgcttacgacccagacgcacgctctttcaatgaggg 247
           ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtcacctggagtaagattctgccctgcttacgacccagacgcacgctctttcaatgaggg 447

                                                                       
Query: 248 tggcacaggagcttcagagggacagcggcagtgtatgccactcacattaaccgtgtgccc 307
           |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 448 tggcacaggagcttcagagggacagcagcagtg-atgccactcacattaaccgtgtgccc 506

                                                                       
Query: 308 agggcgctctcaaccacctgacacctgttactccataactctcccagtctggctggtgtg 367
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 507 agggcgctctcaaccacctgacacctgttactccataactctcccagtctggctggtggg 566

                                                                       
Query: 368 gagtgtcaggacaaagaaattaggactcagaggagctaacagactcacgcgggaccaatg 427
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gagtgtcaggagaaagaaattaggactcagaggagctaacagactcacgcgggaccaatg 626

                                                                       
Query: 428 aaagccacatcaaacctgtcgctgcaccctcacccccaaaacacactgtgacaaatacca 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaagccacatcaaacctgtcgctgcaccctcacccccaaaacacactgtgacaaatacca 686

             
Query: 488 cg 489
           ||
Sbjct: 687 cg 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space:   420562
Effective search space used:   420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)