Query= MSMg01no396_h07.b1 MSMg01no396_h07.b1 CHROMAT_FILE:
MSMg01no396_h07.b1 PHD_FILE: MSMg01no396_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:35 2005
(432 letters)
>mm_chr12_61893671_61894501
Length = 831
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 2/432 (0%)
Strand = Plus / Plus
Query: 1 ggagcaatatagcatgattgtaaaatctgtaaatttaaaacacccaatattagtaaagta 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ggagcaatatagcatgattgtaaaatctgtaa-tttaaaacacccaatattagtaaagta 259
Query: 61 tacaaataagtgtaacatgaaaagcttatgctaatttgaaatcataaaccaatgtgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 260 tacaaataagtgtaacatgaaaagcttatgctaatttgaaatcataaaccaatgtttgtt 319
Query: 121 acggtctaacactgttacattttcagtgctaggatttaaaccagggacctctcacattca 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acggtcaaacactgttacattttcagtgctaggatttaaaccagggacctctcacattca 379
Query: 181 taggaatgtgctccatcaaagagtgacaccctctccagtccaatgctgtcagttttcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taggaatgtgctccatcaaagagtgacaccctctccagtccaatgctgtcagttttcact 439
Query: 241 atagcactactgaataggccttgcttttatctcatagatgagtatgacaatattgaacaa 300
||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 440 atagcactattgaataggccttgcttttatttcatagatgag-atgacaatattgaacaa 498
Query: 301 gtagagccatttttggtcaggtcataaaacaattggcttactattagtctgtcttagaat 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtagagccatttttggtcaggtcgtaaaacaattggcttactattagtctgtcttagaat 558
Query: 361 ctacactaaactatatgtagtttttaaaatcaatcatatatctatattttggttttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctacactaaactatatgtagtttttaaaatcaatcatatatctatattttggttttctct 618
Query: 421 acatttgttgtg 432
||||||||||||
Sbjct: 619 acatttgttgtg 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 831
Length adjustment: 9
Effective length of query: 423
Effective length of database: 822
Effective search space: 347706
Effective search space used: 347706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_h07.g1 MSMg01no396_h07.g1 CHROMAT_FILE:
MSMg01no396_h07.g1 PHD_FILE: MSMg01no396_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:35 2005
(441 letters)
>mm_chr12_62076752_62077594
Length = 843
Score = 830 bits (429), Expect = 0.0
Identities = 439/443 (99%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 1 ttagtcatcaaaaatacatcatgggatactttttaagtagaaaagacaatttttctttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttagtcatcaaaaatacatcatgggatactttttaagtagaaaagacaatttttctttca 584
Query: 61 aaaaaggttttcaacttataattttctcaaggcagaattcaataaagtatgtgaaatcaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaaaaggttctcaacttataattttctcaaggcagaattcaataaagtatgtgaaatcaa 524
Query: 121 aactttctaaagcaaacatagttttcatttgtaaaggtgtaaggaataaaattggataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aactttctaaagcaaacatagttttcatttgtaaaggtgtaaggaataaaattggataaa 464
Query: 181 caataaacctttttatttcaagaatattttacaaccaatgcaaattaaatttctgacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caataaacctttttatttcaagaatattttacaaccaatgcaaattaaatttctgacatg 404
Query: 241 tttttttccccagcaaaatcattccttaaaattgacttttgctaactctttacaaagtat 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttttttcccagcaaaatcattccttaaaattgacttttgctaactctttacaaagtat 344
Query: 301 atatc--ttttttttcttaaactacagcaacatacaggattagctttgtagaaagatcct 358
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atatcttttttttttcttaaactacagcaacatacaggattagctttgtagaaagatcct 284
Query: 359 ctcgatgacacatagttgaaactgtccttttctaaagactataacacaaagtgagtcaga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcgatgacacatagttgaaactgtccttttctaaagactataacacaaagtgagtcaga 224
Query: 419 cagcatagcaatggctatatcca 441
|||||||||||||||||||||||
Sbjct: 223 cagcatagcaatggctatatcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 843
Length adjustment: 9
Effective length of query: 432
Effective length of database: 834
Effective search space: 360288
Effective search space used: 360288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
