MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-397H11
Chromosome	12 (Build37)
Map Location	8,386,804 - 8,386,980
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668380, EG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3
Downstream gene	BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668380 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668380
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG668388 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668388 MGI:3643264
definition	note : predicted gene, EG668388 pseudo : _no_value

name	Apob (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238055 MGI:88052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110057K04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68832 MGI:1916082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238057 MGI:95690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hs1bp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58240 MGI:1913224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC106175 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:724112 MGI:3628444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein

name	Rhob (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11852 MGI:107949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc7a15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328059 MGI:3045351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs

name	Pum2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80913 MGI:1931751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F730043H23 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:208941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Sdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20969 MGI:1349162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Laptm4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17775 MGI:108017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Matn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17182 MGI:1328350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74682 MGI:1921932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75516 MGI:1922766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apob (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625670 GeneID:238055 MGI:88052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein B transcript_id : NM_009693.1

name	1110057K04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541805 GeneID:68832 MGI:1916082
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110057K04 gene transcript_id : NM_172401.2

name	Gdf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859663 GeneID:238057 MGI:95690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth differentiation factor 7 transcript_id : NM_013527.1

name	Hs1bp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803082 GeneID:58240 MGI:1913224
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HCLS1 binding protein 3 transcript_id : NM_021429.2

name	BC106175 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262848 GeneID:724112 MGI:3628444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : cDNA sequence BC106175 transcript_id : XM_001480181.1

name	Rhob (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254647 GeneID:11852 MGI:107949
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ras homolog gene family, member B transcript_id : NM_007483.2

name	Slc7a15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892535 GeneID:328059 MGI:3045351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 transcript_id : NM_177802.3

name	Slc7a15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579830 GeneID:328059 MGI:3045351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 transcript_id : NM_001038660.1

name	LOC100043154 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262850 GeneID:100043154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs product : similar to gag protein transcript_id : XM_001480199.1

name	Pum2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507677 GeneID:80913 MGI:1931751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pumilio 2 (Drosophila) transcript_id : NM_030723.1

name	F730043H23 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262854 GeneID:208941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein F730043H23 transcript_id : XM_001480218.1

name	Sdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892957 GeneID:20969 MGI:1349162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syndecan 1 transcript_id : NM_011519.2

name	Laptm4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109689715 GeneID:17775 MGI:108017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysosomal-associated protein transmembrane 4A transcript_id : NM_008640.2

name	Matn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48976068 GeneID:17182 MGI:1328350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrilin 3 transcript_id : NM_010770.2

name	Wdr35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254214 GeneID:74682 MGI:1921932
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 35 transcript_id : NM_172470.2

name	Ttc32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130580 GeneID:75516 MGI:1922766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 32 transcript_id : NM_029321.2

name	Apob (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625671 GeneID:238055 MGI:88052
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0030301 - cholesterol transport [Evidence IMP]; GO:0006629 - lipid metabolism [Evidence IMP] [Evidence IDA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0006642 - triacylglycerol mobilization [Evidence IMP] codon_start : 1 product : apolipoprotein B protein_id : NP_033823.1

name	1110057K04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541806 CCDS:CCDS25798.1 GeneID:68832 MGI:1916082
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68832 protein_id : NP_765989.2

name	Gdf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859664 GeneID:238057 MGI:95690
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0040007 - growth [Evidence IEA] codon_start : 1 product : growth differentiation factor 7 protein_id : NP_038555.1

name	Hs1bp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946794 GeneID:58240 MGI:1913224
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence TAS] codon_start : 1 note : HS1 binding protein 3 product : HCLS1 binding protein 3 protein_id : NP_067404.1

name	BC106175 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262849 GeneID:724112 MGI:3628444
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480231.1

name	Rhob (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680726 CCDS:CCDS25799.1 GeneID:11852 MGI:107949
definition	GO_component : GO:0010008 - endosome membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence ISS] [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence TAS] [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IDA] [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0008333 - endosome to lysosome transport [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] [Evidence IMP]; GO:0045766 - positive regulation of angiogenesis [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006927 - transformed cell apoptosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : aplysia ras-related homolog B; ras homolog B; ras homolog gene family, member AB product : ras homolog gene family, member B protein_id : NP_031509.1

name	Slc7a15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579831 CCDS:CCDS25800.1 GeneID:328059 MGI:3045351
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; aromatic-preferring amino acid transporter product : aromatic-preferring amino acid transporter isoform 1 protein_id : NP_001033749.1

name	Slc7a15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244348 CCDS:CCDS25801.1 GeneID:328059 MGI:3045351
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; aromatic-preferring amino acid transporter product : aromatic-preferring amino acid transporter isoform 2 protein_id : NP_808470.1

name	LOC100043154 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262851 GeneID:100043154
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001480249.1

name	Pum2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507678 CCDS:CCDS25802.1 GeneID:80913 MGI:1931751
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA] codon_start : 1 exception : mismatches in translation function : translational repressor product : pumilio 2 protein_id : NP_109648.1

name	F730043H23 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262855 GeneID:208941
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480268.1

name	Sdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755438 CCDS:CCDS25803.1 GeneID:20969 MGI:1349162
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence IEA] codon_start : 1 product : syndecan 1 protein_id : NP_035649.1

name	Laptm4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109689716 GeneID:17775 MGI:108017
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : membrane transporter protein product : lysosomal-associated protein transmembrane 4A protein_id : NP_032666.2

name	Matn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48976069 CCDS:CCDS25806.1 GeneID:17182 MGI:1328350
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] GO_function : GO:0005518 - collagen binding [Evidence IEA]; GO:0005201 - extracellular matrix structural constituent [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : matrilin 3 protein_id : NP_034900.2

name	Wdr35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254215 CCDS:CCDS25807.1 GeneID:74682 MGI:1921932
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : WD repeat domain 35 protein_id : NP_766058.2

name	Ttc32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037417 CCDS:CCDS25808.1 GeneID:75516 MGI:1922766
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 32 protein_id : NP_083597.1

name	LOC668380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668380
definition	number : 2 pseudo : _no_value

name	LOC668380 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668380
definition	number : 1 pseudo : _no_value

clone name	MSMg01-059C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357M24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-473H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355O11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469K21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-298G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-084H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-397H11.T7 (MSMg01no397_h11.b1)	MSMg01-397H11.TJ (MSMg01no397_h11.g1)
ACC	AG497800	AG497801
length	777	821
length of high quality (start - end)	---	179 (74 - 252)
definition	CHROMAT_FILE: MSMg01no397_h11.b1 PHD_FILE: MSMg01no397_h11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:09:54 2005	CHROMAT_FILE: MSMg01no397_h11.g1 PHD_FILE: MSMg01no397_h11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:09:55 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACCCAAACGAGGGCGAAAAGGANCACATTCGTAGCGCGGGGAANCNNGGT TTCAAAAAAACGGAANGCAGAGGGACCGCGAAAGAAAAGAGGGAATTTTG CCCAGACTATCCGGAGAGACAAAGCCGGCAGCGAATTAGAACCGCGGGGG GGTCCCGCATTAACCAGAGGCCGCGCAATGAAATAAGAAAACAACGTAAA GGCGGCTGGGAATTAACAACGTTTTTTACCCGCAAAACGCTCAAAGACGC TACCCCTATCTAACCCAGGAACCGCCAAGCCACCCGCTTTTTTTTTTGAA CACAAAATCTACCCCTCGTGCTATTTATGTTTCACCCGCAAACTACTAAG AAATCGAAATTCCCGAAATGGATGAGAGAAATGGGCGCCCCCCCCCCCAC ATTAAATCCACAGACGTATCCATAACCGAAATGCTTCGGGCAAAACATAA CACGGGCGGCCGCATAGTACGCTCAACTATGGGAGGGGCAAAAAGTAAGA GAAATAGACCGTGTACAAGCGAACAGCGAAATCCCAGGATATCAAGGATA CGCGCAGAAAGACAAGGGGAAGCGAAAAGATCCAAGTACACGGAGCCCCG ATAAAAATGCGGAGGAAGACATTCCAGCTTTATCCCTCGTCATGCGCTAC ACACAACCCGTGAAGAGAAGGCAAGGCAGGTTAGAGCTACAGTGACACAA TGTTTATCTAATAGGGGGCCGTACAGGAAAGTGGAACGCGAACGCAAATC AAGCACTACTAAGCGTATAACACTTCC	NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXTTTTCAGAGAAATTCCTTACCCGAAGGTGAGCTCACA GCTGGCCTAACCACTATGCCAGGCGTGCTTCTGTACACAACGACACTAGC CTTGCCCAGGCTCCTGGAGGTACGGCCTGTGCTCCTGCTGTTTCCTGGCT CTGCCCACACACCCCTACCCAGAGTCTATGCTGTGTGTGGAGGTGAGGAA GGTATTTTGAGATGAGGAATTTGTAAAACCTTGCGCAGCGCTCCAGACAG AGCACGACGACAACCCATTTTTGCTAGATTTAGAGTTCAAACGCAACAAC TTAGTTTCCTTTCTTTTTCCCCCCCTACATCCGCTGTTCTACCCTTTCTT CATACAATTTCACGAAGTATTCCCCCCCCCCCTATTTTTTTTTCCCACTA TCATATTTTTACTTTTTTCCTACTTTCTTTTTTCACCCCGTATCCTCTCT TTTTTACTTTCCTTCTTCTTCCCTTTATCTTTGCTCCTACCTTTCCCACG ATTTCCCACCCTACCTTTACCCACATTTTTTTTTTTTATATTCACCCCAT CTTACCTTATGTTCTCATACATCTTCTCGAATTCCTCTTTTCATAATCTT TGTCATCCATATTATTTGGCTCTTATTTTCCCAGATACCCCCCCCCATAA TCTTCCTTTCTCTCATTTACCTATCATTCTTCCAATACCGTACCTTCCGT TTACCAAATTCTTCACCCGCTCACGTTAACTATCTCTCTTGCTATTATTT TTACCTCTCTTTCTTTTTTTG
quality values	Open. Hide. 6 6 6 6 10 13 10 10 9 8 8 8 6 6 6 8 7 8 19 7 8 3 0 3 6 8 6 9 12 9 9 6 6 8 8 8 8 9 14 15 16 15 3 0 3 0 0 3 7 7 9 12 10 10 10 13 11 11 8 8 8 8 10 13 3 0 3 8 8 8 19 20 8 8 6 6 8 8 8 8 8 10 11 13 10 10 8 6 6 10 8 11 11 13 9 9 11 14 10 9 11 11 10 10 10 10 8 8 8 8 8 8 9 9 10 8 8 8 8 8 8 8 10 10 10 10 10 8 8 8 8 8 10 18 13 13 11 12 15 11 9 8 8 8 8 8 8 12 15 15 16 10 10 10 15 10 12 10 12 8 6 6 8 8 8 8 8 8 8 6 6 8 8 9 9 8 8 8 8 7 7 10 8 11 8 8 8 8 8 6 8 8 8 8 8 8 10 8 8 10 8 8 8 8 8 8 8 6 9 10 10 8 8 8 8 8 6 6 8 6 6 6 6 13 10 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 7 9 8 8 8 8 10 8 8 8 9 10 10 10 8 8 8 8 8 10 11 12 12 8 8 8 8 8 6 8 10 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 6 10 11 14 14 22 22 16 11 11 8 8 6 6 8 8 11 12 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 6 6 8 8 8 8 8 10 6 6 6 8 8 8 8 8 6 6 8 8 9 9 8 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 17 15 16 18 14 9 9 8 10 8 8 8 8 10 8 8 6 6 8 8 10 10 10 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 9 11 8 8 6 6 8 8 8 8 10 10 11 11 11 11 9 8 8 8 8 8 8 8 12 10 10 10 8 8 8 8 8 7 9 8 8 10 10 10 10 9 9 10 9 9 8 6 6 6 8 8 9 8 10 10 10 10 10 10 11 11 12 16 15 8 8 7 7 8 8 6 6 8 8 15 8 8 8 8 8 8 8 8 12 9 9 8 8 8 8 10 8 8 8 8 6 6 8 8 8 8 8 6 6 8 8 10 10 15 15 12 10 9 9 8 8 9 9 9 9 10 11 12 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 9 12 11 14 8 10 8 8 6 6 8 8 9 8 8 8 10 10 10 8 8 8 8 8 8 6 6 6 6 8 8 6 6 8 8 8 8 10 10 8 8 8 10 10 11 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 9 9 10 8 8 8 8 8 8 8 8 8 10 10 10 10 16 11 11 10 10 10 10 10 10 10 10 10 8 8 8 10 8 8 9 8 8 8 8 9 9 9 9 9 9 9 10 13 13 12 8 8 8 8 8 8 8 8 8 6 8 8 8 8 10 8 8 8 8 8 8 7 7 7 8 8 8 10 10 10 10 10 17 15 13 9 8 10 10 10 8 8 8 8 9 9 8 8 8 8 8 8 6 6 6 6 8 8 8 9 9 9	Open. Hide. 0 3 8 6 8 8 15 11 8 8 8 8 11 7 7 7 13 11 14 11 27 11 25 22 25 25 37 44 39 39 33 23 17 15 7 7 7 8 8 8 7 7 7 9 9 9 17 13 18 29 34 44 47 36 33 33 33 37 37 25 21 10 15 10 8 8 8 7 7 7 9 9 10 17 18 22 37 33 59 59 48 50 53 53 57 53 53 50 50 50 50 59 59 59 50 50 50 50 42 42 50 50 59 68 68 68 68 68 68 68 51 50 50 50 50 57 44 42 32 32 32 37 36 36 30 30 30 44 44 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 50 50 50 50 47 47 57 57 57 57 59 48 59 57 57 57 68 57 57 59 59 57 59 57 57 57 59 59 59 59 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 59 59 59 68 68 68 68 68 68 54 53 57 57 57 57 57 57 59 59 59 59 59 59 48 48 48 59 59 53 50 48 46 46 46 30 30 12 10 9 10 10 8 8 9 9 8 8 19 14 14 11 15 8 8 6 6 8 8 6 6 10 10 10 10 10 10 10 10 8 9 9 9 9 9 11 16 11 8 8 8 8 8 10 10 6 8 6 6 10 8 8 8 8 8 8 8 8 13 8 10 8 11 8 8 9 9 9 6 6 6 6 6 3 3 3 7 8 8 8 8 8 10 10 12 10 7 6 6 6 8 8 8 8 8 8 8 8 8 8 9 10 14 9 9 9 10 15 11 11 8 8 8 8 8 8 16 23 23 23 11 15 10 8 8 8 8 8 6 7 8 8 8 6 8 6 6 8 8 8 8 7 6 6 6 8 10 8 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 10 14 19 17 14 9 9 9 10 10 10 12 9 9 13 12 16 11 11 12 8 10 8 8 10 8 8 8 8 8 8 8 8 9 11 12 10 12 9 9 9 10 14 20 20 24 20 18 19 8 8 6 7 10 8 10 10 9 9 9 7 8 6 6 8 10 10 8 8 8 10 9 11 9 9 9 11 10 10 15 11 11 12 10 10 10 15 15 12 19 13 12 12 12 12 12 12 13 10 10 10 9 8 8 8 8 8 12 10 10 9 9 10 10 8 8 8 6 6 8 8 9 10 10 10 9 9 9 9 9 12 17 23 12 8 8 6 6 10 10 10 10 10 10 10 14 11 11 8 8 10 8 8 8 8 10 11 10 10 9 10 10 12 10 9 8 8 8 8 6 11 6 6 8 8 8 7 6 8 10 11 9 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 13 13 9 9 9 9 9 9 9 9 14 14 13 9 9 9 10 10 10 9 9 11 8 8 8 6 6 8 6 6 6 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 9 8 8 6 7 8 8 8 8 8 8 8 8 8 8 8 10 13 14 15 15 15 16 15 9 9 8 10 10 10 10 9 9 10 10 10 12 16 15 8 8 10 8 8 8 12 8 6 8 8 8 12 12 9 9 9 9 9 10 13 14 12 11 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 8 11 8 8 8 10 11 9 9 8 8 10 10 11 12 12 12 12 12 8 8 6 6 6 6 6 8 8 8 10 8 8 8 8 8 8 13 10 11 12 8 7 7 10 10 12 9 10 10 10 10 12 10 8 8 12 10 10 8 8 9 9 10 8 10 8 8 8 8 10 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no397_h11.g1 MSMg01no397_h11.g1 CHROMAT_FILE:
MSMg01no397_h11.g1 PHD_FILE: MSMg01no397_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:55 2005
         (179 letters)



>mm_chr12_8386604_8387180
          Length = 577

 Score =  335 bits (173), Expect = 1e-96
 Identities = 177/179 (98%), Gaps = 2/179 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattccttacccgaaggtgagctcacagctggcctaaccactatgccaggcgtgcttctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccttacccgaaggtgagctcacagctggcctaaccactatgccaggcgtgcttctg 260

                                                                       
Query: 61  tacacaacgacactagccttgcccaggctcctggaggtacggcctgtgctcctgctgttt 120
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacacaacgac--tagccttgcccaggctcctggaggtacggcctgtgctcctgctgttt 318

                                                                      
Query: 121 cctggctctgcccacacacccctacccagagtctatgctgtgtgtggaggtgaggaagg 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cctggctctgcccacacacccctacccagagtctatgctgtgtgtggaggtgaggaagg 377


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 577
Length adjustment: 8
Effective length of query: 171
Effective length of database: 569
Effective search space:    97299
Effective search space used:    97299
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information