Query= MSMg01no401_a21.b1 MSMg01no401_a21.b1 CHROMAT_FILE:
MSMg01no401_a21.b1 PHD_FILE: MSMg01no401_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:35 2005
(153 letters)
>mm_chr12_41378055_41378607
Length = 553
Score = 273 bits (141), Expect = 4e-78
Identities = 150/153 (98%)
Strand = Plus / Plus
Query: 1 gtttcattgtttactttcctgaggctgacacagaccacatagtgaccaaactgccagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttcattgtttactttcctgaggctgacacagaccacatagtgaccaaactgccagtga 260
Query: 61 tgcagagccatatgtccactcctgaagaggcacaagatacagacatcttaatactggcct 120
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tgcagagccatatgtccgctcctgaagaggcacaagatacaggcatcttaatactggcct 320
Query: 121 tcttggtgacacagcaactgtgacctcttgcct 153
|| ||||||||||||||||||||||||||||||
Sbjct: 321 tcatggtgacacagcaactgtgacctcttgcct 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_a21.g1 MSMg01no401_a21.g1 CHROMAT_FILE:
MSMg01no401_a21.g1 PHD_FILE: MSMg01no401_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:35 2005
(461 letters)
>mm_chr12_41517706_41518566
Length = 861
Score = 752 bits (389), Expect = 0.0
Identities = 423/439 (96%), Gaps = 9/439 (2%)
Strand = Plus / Minus
Query: 24 tagtaatgctacttaattgtcactttgaatgtgctttattactaatatactgactataaa 83
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 861 tagtaatgctatttaattgtcactttgaatgtgctttattactaatatgctgactataaa 802
Query: 84 agcattaaagaaaaatatttatagcccttttaaactttatttttattattatga-ttttt 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 801 agcattaaagaaaaatatttatagcccttttaaactttatttttattattatgatttttt 742
Query: 143 taatattctagtaatatgttaaaagtaaacaaaagaataaaattttccattgaacaaatc 202
| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 ttatgttctagtaatatgttaaaagtaaacaaaagaa--------tccattgaacaaatc 690
Query: 203 tggtcccttaaaatataaaataattatagaggtttaattattactttgattctagtgtca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tggtcccttaaaatataaaataattatagaggtttaattattactttgattctagtgtca 630
Query: 263 acgtacatcttatatttcacagtcatatttatataaaagcaatccaaactgcaaattatc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acgtacatcttatatttcacagtcatatttatataaaagcaatccaaactgcaaattatc 570
Query: 323 agccccttactaatgtagataagaggcattaaagaaacagagcatgcatttattaatctt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agccccttactaatgtagataagaggcattaaagaaacagagcatgcatttattaatctt 510
Query: 383 atgaattcattataaataattaatcataaatctcaaggggttcattccacagaatgcttt 442
|||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||
Sbjct: 509 atgaattcattataaataattaatcacaaatctcaagggtttcattccaccgaatgcttt 450
Query: 443 tgtattttagctctttgtt 461
|||||||||||||||||||
Sbjct: 449 tgtattttagctctttgtt 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
