Query= MSMg01no402_d11.b1 MSMg01no402_d11.b1 CHROMAT_FILE:
MSMg01no402_d11.b1 PHD_FILE: MSMg01no402_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:02 2005
(405 letters)
>mm_chr12_3444551_3445355
Length = 805
Score = 745 bits (385), Expect = 0.0
Identities = 400/405 (98%)
Strand = Plus / Minus
Query: 1 cagagcagcttagagttaaagtgagaattttgtaatagtattcgttttcccatgcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cagagcagcttagagttaaagtgagaattttgtaatagtattcgttttcccatgcatttt 546
Query: 61 tattacaaggagtcataaagccatcaacaatggccttgcaggttatttgcttctcagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tattacaaggagtcataaagccatcaacaatggccttgcaggttatttgcttctcagtga 486
Query: 121 tctacaatgaatctgatgcaaatttattagattctattgttgctgttgctgggtatacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctacaatgaatctgatgcaaatttattagattctattgttgctgttgctgggtatacag 426
Query: 181 gcacttgtttgtactctcagatttatgaattctaggccaacataggctatttagtaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcacttgtttgtactctcagatttatgaattctaggccaacataggctatttagtaaatc 366
Query: 241 ctggtttattaaaacaaaacaaaacagcaagctgggaaaggtggtatatacctgtaatct 300
|||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctggctgaagaaaacaaaacaaaacagcaagctgggaaaggtggtatatacctgtaatct 306
Query: 301 cattatttacaaggttcaattttcagaccaccctgagttttttatagatcctgtctatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cattatttacaaggttcaattttcagaccaccctgagttttttatagatcctgtctatcc 246
Query: 361 ctctcccaaaaaaagaaaacaaaagctatgtctatcaatacctaa 405
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 245 ctctcccaaaaaaagaaaacaaaagctttgtctatcaatacctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_d11.g1 MSMg01no402_d11.g1 CHROMAT_FILE:
MSMg01no402_d11.g1 PHD_FILE: MSMg01no402_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:02 2005
(239 letters)
>mm_chr12_3293393_3294031
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 tggccagcctatactatctgtgaccctgttcaaaacaaacaaaacacctatgagggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tggccagcctatactatctgtgaccctgttcaaaacaaacaaaacacatatgagggaggg 260
Query: 61 agggtggaggcaaaagtgggaagaatggcagggaggctacagaattttcaaaaatgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggtggaggcaaaagtgggaagaatggcagggaggctacagaattttcaaaaatgcaca 320
Query: 121 cctattccctaacttaagggaggtaaaatattgttaaaattatgactataaaagataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctattccctaacttaagggaggtaaaatattgttaaaattatgactataaaagataaat 380
Query: 181 taattcaatacttgctcttttgtaagcaagcatttatgaggatttgaatcagccaaaat 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taattcaatacttgctcttttgtaagcaagcatttatgaggatttgaatcagccaaaat 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|