Query= MSMg01no402_f19.b1 MSMg01no402_f19.b1 CHROMAT_FILE:
MSMg01no402_f19.b1 PHD_FILE: MSMg01no402_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:13 2005
(312 letters)
>mm_chr12_99433629_99434344
Length = 716
Score = 514 bits (266), Expect = e-150
Identities = 303/316 (95%), Gaps = 4/316 (1%)
Strand = Plus / Minus
Query: 1 tgccaggtaataaaagtctagatcca-tttttcccagaatgctcaaccccccgcctttta 59
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 516 tgccaggtaataaaagtctagatccattttttcccagaatactcaaccccccgcctttta 457
Query: 60 aattgactaatatttgctctttgacaatttaattcatgtactcagtactttctatttgct 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 456 aattgactaatatttgctctttgacaatttaattcatgtactcagtacattctatttgct 397
Query: 120 ccca-cccctccctctcttatcgccttctcatctct--cgtttccttggccttctctcta 176
|||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 396 cccaccccctccctctcttatccccttctcatctctcccctttccttggccttctctcta 337
Query: 177 aagctccctctccctcacttgccttttggtttgctttgtgacttttggttggtgccaaat 236
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 336 aagctccctctccctcacatgccttttgttttgctttgtgacttttggttggtgccaaac 277
Query: 237 tggagtctccacgtttatatttgtccccaaagctactttatccttaagcagagaagcttg 296
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tggagtctccatgattatatttgtccccaaagctactttatccttaagcagagaagcttg 217
Query: 297 gggtactgagactaaa 312
||||||||||||||||
Sbjct: 216 gggtactgagactaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 716
Length adjustment: 9
Effective length of query: 303
Effective length of database: 707
Effective search space: 214221
Effective search space used: 214221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_f19.g1 MSMg01no402_f19.g1 CHROMAT_FILE:
MSMg01no402_f19.g1 PHD_FILE: MSMg01no402_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:13 2005
(454 letters)
>mm_chr12_99290868_99291719
Length = 852
Score = 808 bits (418), Expect = 0.0
Identities = 445/454 (98%), Gaps = 2/454 (0%)
Strand = Plus / Plus
Query: 1 agaaaaaatggtttcagttaaaacccatctataacttctccctctcacgaaaacacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaaaatggtttcagttaaaacccatctataacttctccctctcacgaaaacacatta 260
Query: 61 agatggcagtaaaggaactattcagagtataaaaccctagcagacaaagagaatgggagg 120
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctggcagtaaaggaactattccgagtataaaaccctagcagacaaagagaatgggagg 320
Query: 121 aggacttgaaatcttttcaaattcaacaaatttgagcaacataataaagcaattggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacttgaaatcttttcaaattcaacaaatttgagcaacataataaagcaattggagaa 380
Query: 181 gcagagatggaacgagtactggaggaggccacagtgttatggagacagagttcacgcaat 240
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gcagagatggagcgagtactggaggaggccacagtgttacggagacagagttcacgcaat 440
Query: 241 ggatgtctttgatagctgtagaattgggcgacagcagatttcatgaaaatgaagagtgat 300
||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 gga-gcctttgatagctgtagaattgggcgacagcagatttcatgaaaatcaagagtgat 499
Query: 301 gctaacggcccaaaccacagtttattagtttgtcaaaaatgccatactggggtctgctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctaacggcccaaaccacagtttattagtttgtcaaaaatgccatactggggtctgctga 559
Query: 361 ctagatgatggcctcactttagatctataatgttttttcccaagggctcatgtcttacac 420
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 560 ctagatgatggcctcactttagatctataatgttctt-cccaagggctcatgtcttacac 618
Query: 421 acttagtcagctgcttggcactgctggaaggtgg 454
||||||||||||||||||||||||||||||||||
Sbjct: 619 acttagtcagctgcttggcactgctggaaggtgg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 852
Length adjustment: 10
Effective length of query: 444
Effective length of database: 842
Effective search space: 373848
Effective search space used: 373848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
