Query= MSMg01no402_g07.b1 MSMg01no402_g07.b1 CHROMAT_FILE:
MSMg01no402_g07.b1 PHD_FILE: MSMg01no402_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:16 2005
(243 letters)
>mm_chr12_99913421_99914063
Length = 643
Score = 408 bits (211), Expect = e-118
Identities = 234/242 (96%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 1 gccttctgagngctggggttataagtaaggcttccaccaccatgcccgatttaaattatg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccttctgagtgctggggttataagtaaggcttccaccaccatgcccgatttaaattatg 382
Query: 61 cctttaaaggagattcctgggtataaatttagtaagaagagagcacatgagacaagataa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttaaaggagactcctgggtataaatttagtaagaagagagcacatgagacaagataa 322
Query: 121 agtgatcttttatttgaaattcatttttaaaagctaaaccccaggcgggtctttttgtag 180
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||
Sbjct: 321 agtgatcttttatttgaaattcatttttaaaaactaaaccccaggtgggtctttttggag 262
Query: 181 tgacagccgagagaactttctatatctctgctctagtcatagta-gctgagattatgtcc 239
|||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct: 261 tgacagccgagagaactttctatatctctgctctagtcgtagtaag-tgagattatgtcc 203
Query: 240 ag 241
||
Sbjct: 202 ag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_g07.g1 MSMg01no402_g07.g1 CHROMAT_FILE:
MSMg01no402_g07.g1 PHD_FILE: MSMg01no402_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:16 2005
(133 letters)
>mm_chr12_99706770_99707302
Length = 533
Score = 257 bits (133), Expect = 2e-73
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 agagcctgaaaagcagaaacaggatgatcccttggagcccaactggtcagtcagtttagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagcctgaaaagcagaaacaggatgatcccttggagcccaactggtcagtcagtttagc 260
Query: 61 caaattgacaagtgacaagctctgggttcaatgaaaagaccaccccaaaaactaaggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaattgacaagtgacaagctctgggttcaatgaaaagaccaccccaaaaactaaggtca 320
Query: 121 agattcattgagg 133
|||||||||||||
Sbjct: 321 agattcattgagg 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 533
Length adjustment: 8
Effective length of query: 125
Effective length of database: 525
Effective search space: 65625
Effective search space used: 65625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
