Query= MSMg01no406_d06.b1 MSMg01no406_d06.b1 CHROMAT_FILE:
MSMg01no406_d06.b1 PHD_FILE: MSMg01no406_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:26 2005
(527 letters)
>mm_chr12_5968773_5969699
Length = 927
Score = 926 bits (479), Expect = 0.0
Identities = 515/527 (97%)
Strand = Plus / Minus
Query: 1 tgccggtgggtcacctaacttccctattttcttctgtaaaaaatgtttgatgcttgattt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 tgccagtgggtcacctaacttccctattttcttctgtaaaaaatgtttgatgcttgattt 864
Query: 61 gacaaattacattcatatctacactcccttgtgtcacttttgtcatcccttcttctcacc 120
||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||
Sbjct: 863 gacaaattacattcagatccacactcccttgtgtcacttttgtcgtcccttcttcttgcc 804
Query: 121 aacactttgcccacctgtaaccggaaccagagtttcgcctgtggatcaaggacccaagtg 180
|||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||
Sbjct: 803 aacactttgcccacctgtaaccggaacccgagtttcacctgtggatcgaggacccaagtg 744
Query: 181 aggttcgtctgtggcatgcaacagccacccagtggtcttttgaattcttactattctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aggttcgtctgtggcatgcaacagccacccagtggtcttttgaattcttactattctaat 684
Query: 241 aaatatttatttttgtttctctgacaactgatggttttgagattcccttcatgcaattat 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaatataaacttttgtttctctgacaactgatggttttgagattcccttcatgcaattat 624
Query: 301 tgattatatttcttcattggtatcaattcaaatcctttacccattgaatggttttcctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgattatatttcttcattggtatcaattcaaatcctttacccattgaatggttttcctat 564
Query: 361 tatgttgttgttaagagtgaactactaataatttctcttggtctatggaaatttttaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tatgttgttgttaagagtgaactactaataatttctcttggtctatggaaatttttaaag 504
Query: 421 aattattagggggccttattatcaactgcttcttctacaattcacatcctgtttaaggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aattattagggggccttattatcaactgcttcttctacaattcacatcctgtttaaggta 444
Query: 481 tcatatcattgtcaagtgacagtcacaaaattactctatcttcactc 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcatatcattgtcaagtgacagtcacaaaattactctatcttcactc 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_d06.g1 MSMg01no406_d06.g1 CHROMAT_FILE:
MSMg01no406_d06.g1 PHD_FILE: MSMg01no406_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:26 2005
(248 letters)
>mm_chr12_5812207_5812854
Length = 648
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 4 ttttttttttttggtgtatccttttttcttagcatgattcaacttgctgttattttattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttttttttttttggtgtatccttttttcttagcatgattcaacttgctgttattttattt 263
Query: 64 gagtatcacaaggtcagattccctcatgggcataataaggcagctgctagacaagaatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtatcacaaggtcagattccctcatgggcataataaggcagctgctagacaagaatag 323
Query: 124 acaggtatgggctgggtaaggaaagggcctttacttctgagaatcaagacacttagggca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaggtatgggctgggtaaggaaagggcctttacttctgagaatcaagacacttagggca 383
Query: 184 aagtgtcaggtcagagcatgtgctttgaggtggaacttcctaagctttctcctatgtagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagtgtcaggtcagagcatgtgctttgaggtggaacttcctaagctttctcctatgtagg 443
Query: 244 tgcct 248
|||||
Sbjct: 444 tgcct 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
