Query= MSMg01no406_l02.b1 MSMg01no406_l02.b1 CHROMAT_FILE:
MSMg01no406_l02.b1 PHD_FILE: MSMg01no406_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:06 2005
(465 letters)
>mm_chr12_95455590_95456454
Length = 865
Score = 837 bits (433), Expect = 0.0
Identities = 454/461 (98%)
Strand = Plus / Plus
Query: 5 gaattcaattaattttacataaaatgtacacagaataacattgaaacatctgtgtacatt 64
|||||||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcaattaacaatagataaaatgtacacagaataacattgaaacatccgtgtacatt 264
Query: 65 attgcttctttttctctatagggctttcagaagaaaatcttatgttgtttctgtcttaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgcttctttttctctatagggctttcagaagaaaatcttatgttgtttctgtcttaac 324
Query: 125 aaaactgctagtagttactggctttccaggttaggaagagagagagacactgaaaaatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaactgctagtagttactggctttccaggttaggaagagagagagacactgaaaaatgg 384
Query: 185 ccataacatttaggaaaatcagttaagaatgatcttgctacattgcattattaaaacaga 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccataacatttaggaaagtcagttaagaatgatcttgctacattgcattattaaaacaga 444
Query: 245 acgttatattgttgcctattgttgggctccgtacttctggctggtcctcagtgggagagc 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 acgttatattgttgcctattgttgggctccgcacttctggctggtcctcagtgggagagc 504
Query: 305 acgtagcttatgctttggcaataagaatcccacagcaagtgctcctcccagatgctgtac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acgtagcttatgctttggcaataagaatcccacagcaagtgctcctcccagatgctgtac 564
Query: 365 aaggaagcactggtactttcagagtcacatctggcagccagtgatggaggaaatagacca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaggaagcactggtactttcagagtcacatctggcagccagtgatggaggaaatagacca 624
Query: 425 tggggattctccggggctgccagctccactttgagaatttc 465
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggggattctccggggctgccagctccactttgagaatttc 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_l02.g1 MSMg01no406_l02.g1 CHROMAT_FILE:
MSMg01no406_l02.g1 PHD_FILE: MSMg01no406_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:06 2005
(406 letters)
>mm_chr12_95640956_95641761
Length = 806
Score = 710 bits (367), Expect = 0.0
Identities = 397/407 (97%), Gaps = 2/407 (0%)
Strand = Plus / Minus
Query: 1 aatattcacaaggagcctgagacttcatcttcccagagtgaaaagtaagcttgagctaca 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aatattcacaaggagcccgagacttcatcttcccagagtgaaaagtaagcttgagctaca 547
Query: 61 cagtccaaaatcaggttcacaaaggagtccaaaagcccagcacctagttagttctgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cagtccaaaatcaggttcacaaaggagtccaaaagcccagcacctagttagttctgctct 487
Query: 121 caaaactagcctcatcatcctccatggtaaataaataatgtgtgctcagcagcaccaaga 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caaaactagcctcatcgtcctccatggtaaataaataatgtgtgctcagcagcaccaaga 427
Query: 181 tataatcaaaataccctcatctc-gatacaatagcctgatgcatcaggtggagttttttt 239
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 426 tataatcaaaataccctcatc-cggatacaatagcctgatgcatcaggtggagttttttt 368
Query: 240 taaaggtgtttttttatctgatttttttgtgaatcagttttcagttctcagcaaaattat 299
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcaaggtgaatttttatctgatttttttgtgaatcagttttcagttctcagcaaaattat 308
Query: 300 tgtcagtaagcacatatttgtaacaaagtcaaacttttctggaaagagtgtcaaatttta 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 307 tgtcagtaagcacatatttgtaacaaagtcaaacttttctggaaagaatgtcaaatttta 248
Query: 360 tgtgaataaaatacaacatacaaattcagtattatactttttattgt 406
||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgttcataaaatacaacatacaaattcagtattatactttttattgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
