Query= MSMg01no407_a12.b1 MSMg01no407_a12.b1 CHROMAT_FILE:
MSMg01no407_a12.b1 PHD_FILE: MSMg01no407_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:33 2005
(541 letters)
>mm_chr12_120412037_120412977
Length = 941
Score = 994 bits (514), Expect = 0.0
Identities = 531/537 (98%)
Strand = Plus / Plus
Query: 5 gaattctgactatttacagcaggaaacatggttttggcaaaaatgaaacttgaatttcaa 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgacaatttacagcaggaaacatggttttggcaaaaatgaaacttgaatttcaa 264
Query: 65 atgattttgactatcatgaaacgttaagtgttttataaatacatagttgaaacagttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgattttgactatcatgaaacgttaagtgttttataaatacatagttgaaacagttttg 324
Query: 125 tgggggtggcatttctaaactgactgtgcataggaatcactggtgaaacactgttgtaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgggggtggcatttctaaactgactgtgcataggaatcactggtgaaacactgttgtaca 384
Query: 185 aggttctctaagatgggcttagggattttatcatctctatgcttgcttgcatccatgatg 244
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtttctctaagatgggcttacggattttatcatctctatgcttgcttgcatccatgatg 444
Query: 245 tttgccttaattctaaagcagggcttcatatagggtacagtaccatgaattaatttacac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgccttaattctaaagcagggcttcatatagggtacagtaccatgaattaatttacac 504
Query: 305 agtcattcattaaatgactcactcattaaacatctactgcttgatgtcaagtattgggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtcattcattaaatgactcactcattaaacatctactgcttgatgtcaagtattgggca 564
Query: 365 cacactaaggccttccatcacaatattacagttccaaaggatccaactactttaaatata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacactaaggccttccatcacaatattacagttccaaaggatccaactactttaaatata 624
Query: 425 tcttttanatatgtgtgcatttggtcatatacatctgagcctggcacacgcaaaaatcct 484
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 tcttttaaatatgtgtgcatttggtcatatacatctgagcctggcacatgcaaaaatcct 684
Query: 485 gattttaaacttataaagaaaaataacagtgatgtgaaatatgtggctacgaaagga 541
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 685 gattttaaacttataaagaaaaataacagtgatgtgaaatatgtggctatgaaagga 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_a12.g1 MSMg01no407_a12.g1 CHROMAT_FILE:
MSMg01no407_a12.g1 PHD_FILE: MSMg01no407_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:33 2005
(517 letters)
>mm_chr12_120456420_120457335
Length = 916
Score = 992 bits (513), Expect = 0.0
Identities = 516/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Minus
Query: 1 acataaaaccaggctaataatgtatgtctgtagtctcattataccagtggcaagatggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 acataaaaccaggctaataatgtatgtctgtagtctcattataccagtggcaagatggga 657
Query: 61 ggcagagataggagaatacgaagaagttcactggccatctgacttgagtgaggcgtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggcagagataggagaatacgaagaagttcactggccatctgacttgagtgaggcgtttgg 597
Query: 121 tatagtgaaaacaagaaaccttttacaaacgataagtgtaaaagtcacacacagaaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tatagtgaaaacaagaaaccttttacaaacgataagtgtaaaagtcacacacagaaacag 537
Query: 181 acacacaggtttacagaattaaaagcaagctgaattccttacactgcaggtgttgccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 acacacaggtttacagaattaaaagcaagctgaattccttacactgcaggtgttgccttg 477
Query: 241 cggttttaatcaagtgcacacctgcaatatgactcttggtttggaaggtttgatgcagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cggttttaatcaagtgcacacctgcaatatgactcttggtttggaaggtttgatgcagac 417
Query: 301 aaagcatttctcttaccagaggacatttttcttttgcctttttaaccaaggcattttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 416 aaagcatttctcttaccagaggacatttttcttttgcctttttaaccaaggca-tttttc 358
Query: 361 tggcctgagaaacactgtgttttaggtttactgttgttgctgtttgtttttaaagtggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tggcctgagaaacactgtgttttaggtttactgttgttgctgtttgtttttaaagtggga 298
Query: 421 gaacaggaaattcctacctgccaggaattgaaaaggaaaataggaagaaacccctagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaacaggaaattcctacctgccaggaattgaaaaggaaaataggaagaaacccctagaac 238
Query: 481 tcacttgatctagtatattaagttcaaaacatgtagg 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcacttgatctagtatattaagttcaaaacatgtagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 916
Length adjustment: 10
Effective length of query: 507
Effective length of database: 906
Effective search space: 459342
Effective search space used: 459342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
