Query= MSMg01no407_a21.b1 MSMg01no407_a21.b1 CHROMAT_FILE:
MSMg01no407_a21.b1 PHD_FILE: MSMg01no407_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:35 2005
(596 letters)
>mm_chr12_56716783_56717778
Length = 996
Score = 1091 bits (564), Expect = 0.0
Identities = 580/590 (98%), Gaps = 8/590 (1%)
Strand = Plus / Plus
Query: 7 gaattcatagaagtgttcgttgtaaattttaaaacatttcaaggtaaaattagcttaaca 66
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 207 gaattcatagaagtgtttgttgtaaattttaaaacatttcaaggtaaaattagcttaaaa 266
Query: 67 tttttagctggtaggaattatagaaatggcctgtcaaacacacacttacttctacccctc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttttagctggtaggaattatagaaatggcctgtcaaacacacacttacttctacccctc 326
Query: 127 ccccattcacacatccccacccactcacaaagacacacacacacacacacacacacacac 186
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 327 ccccattcacacatccccacccactcacaaag--------acacacacacacacacacac 378
Query: 187 acacacacacacacacacacacacacctaccctccccacccacacaggtgctgtaatcat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acacacacacacacacacacacacacctaccctccccacccacacaggtgctgtaatcat 438
Query: 247 agcaatataattatccactaatcctctgtccttgtattttctgcaaagcaggaaagggga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agcaatataattatccactaatcctctgtccttgtattttctgcaaagcaggaaagggga 498
Query: 307 agggatattacaattctgaaaataatgaagggcactacacatgctctgtcacaaagaaat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agggatattacaattctgaaaataatgaagggcactacacatgctctgtcacaaagaaat 558
Query: 367 agtttaaagctaagctgaacttcattaggcttacattagtagacctttgagtaattgctt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtttaaagctaagctgaacttcattaggcttacattagtagacctttgagtaattgctt 618
Query: 427 ttaattttaaatttcaagacaggctgttaagaaaatgagcccagttttaccctggcccta 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttaattttaaatttcaagacaggctgttaagaaaatgagcccagttttaccctggcccta 678
Query: 487 gaaagataagtatgaattctcctttctacagtttatagagatttcaccatctgcttctat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaaagataagtatgaattctcctttctacagtttatagagatttcaccatctgcttctat 738
Query: 547 tcactttattagggctttaaagaatacaaacacactgttaactcaaaggt 596
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tcactttattagggctttaaagaatacaaacacactgttaactcaaaggt 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_a21.g1 MSMg01no407_a21.g1 CHROMAT_FILE:
MSMg01no407_a21.g1 PHD_FILE: MSMg01no407_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:35 2005
(380 letters)
>mm_chr12_56901493_56902272
Length = 780
Score = 681 bits (352), Expect = 0.0
Identities = 371/378 (98%), Gaps = 2/378 (0%)
Strand = Plus / Minus
Query: 3 aaaataaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttccattctgtaggacga 62
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 673 aaaataaa--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttccattctgtaggacga 616
Query: 63 ctcttctccatttcttggcaatgtcctttgaagcaagtaaacaagcagaaacagataacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctcttctccatttcttggcaatgtcctttgaagcaagtaaacaagcagaaacagataacc 556
Query: 123 aagtcagtttcttttttctttttctttctgtagtgtttgtggtcagacccaggccatgca 182
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 555 aagtcagtttcttttttctttttctttctgtagtgttggtggtcagacccaggccatgca 496
Query: 183 aggcaaaggctggacctctgtgccaccttctttctcctatttttttctttcattacttag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aggcaaaggctggacctctgtgccaccttctttctcctatttttttctttcattacttag 436
Query: 243 ctttttatctaagaaataatttctagcccaaggttgttttctttgaagagttacatttac 302
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 435 ctttttatctaagaaataatttctagcccaagattgttttctttgaagagttacatttac 376
Query: 303 atatgtccttttgagtttctaatacatatggtatgaggtatgagtcattcttgattttgt 362
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 375 atatgtccttttgagtttctaatacatatggtatgagttatgagtcattcttgattttgt 316
Query: 363 tacacatgtgaatccagt 380
||| ||||||||||||||
Sbjct: 315 tactcatgtgaatccagt 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
