ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTGATCTTTCCAAACTTTTATCATGAATGGGTGTTGGATCTTGTCAAA
TGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGTT
TGTTTATATAATGGATTACATTGATGGATTTTCGTATATTAAACCATCCC
TGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAAT
GTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATCGA
TATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTTC
TGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGGTAG
AGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTTCAGAATTGGAATTA
GATCTTCTTTGAAGGTCTGGTAGAACTCTGCACTAAACCCATCTGGTCCT
GGGCTTTTTTTGGTTGGGAGACTATTAATAACTGCTTCTATTTCTTTAGG
TGATATGGGACTGTTTAGATGGTCAACTTGATCCTGATTCAACTTTGGTA
CCTGGTATCTGTCCAGAAATTTGTCCAATTTCGTCCAGGTTTTCCAGTTC
TGTTGATATAGCCTTTTTGACAAGGATCCGATGGTGCTTTGAATTTCTTC
NCCATCTGTTGGTATTTATCCCTTTTCATTCCTGATCTTGTTATTAACTC
TATTTCCCCGCTTCCN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTCTCCTCTGCATTGTTTTGA
AAGAATATTTTCAAAATTTGGTGAGACTTGCCCTCACCCCCCACCATCAC
CACCAAGAGCTGTTGCCAGCTTCCCCCTGAGTACCAAGTCCAATTCTGAT
GAATGTCTGAAGCTTTCCCTACAACTGGACAAACCATTCTGAGTGATTGT
CCACCTCAGCTTTAAAATCTTGTAGTTTCTATATTATTGGACTTTGATAT
ACATTGTTCTAAACAAGCAAAATTATATTTGTAAAAATCTGAGACTCCCC
ATGTGAATTCAGGATTTGTTACATGCAAAGAACTGAGTAGTCAAAAGAGC
AACAAGTTATCTCATTTCTTAATGCCCCGTCTAAAGCTTTGGAATAGGCT
ATTGACTCCAACTTCCTGAACTGTTTTTCTACTTGAAAAATCAATGTGAG
AAAAAATATAGACATATATGTGAAAATACAATTATGAAAACTTATTATTG
TATATCTTCTCTTAAAAATTAATCATAAACTTCCTATTCTATTAGGTACA
GTGTATTTGGATTTATAATAATATCCTTGAATCCACTTGTACTTGATCTT
TATGCTTGGTGATTAAATTTTGTTCTATTTTGATTTTCCTCCACATGCTT
ATCCATCTATTAAATCATCATACATTGGTTTGCATATTTATCCCCATTCT
TATCCCTGTTTCGACTTTTTTCCCTATTTTCTCCTG

Query= MSMg01no409_a10.g1 MSMg01no409_a10.g1 CHROMAT_FILE:
MSMg01no409_a10.g1 PHD_FILE: MSMg01no409_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:14 2005
         (511 letters)



>mm_chr12_39696034_39696945
          Length = 912

 Score =  959 bits (496), Expect = 0.0
 Identities = 508/512 (99%), Gaps = 1/512 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctctcctctgcattgttttgaaagaatattttcaaaatttggtgagacttgccctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcctctcctctgcattgttttgaaagaatattttcaaaatttggtgagacttgccctcac 653

                                                                       
Query: 61  cccccaccatcaccaccaagagctgttgccagcttccccctgagtaccaagtccaattct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cccccaccatcaccaccaagagctgttgccagcttccccctgagtaccaagtccaattct 593

                                                                       
Query: 121 gatgaatgtctgaagctttccctacaactggacaaaccattctgagtgattgtccacctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gatgaatgtctgaagctttccctacaactggacaaaccattctgagtgattgtccacctc 533

                                                                       
Query: 181 agctttaaaatcttgtagtttctatattattggactttgatatacattgttctaaacaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agctttaaaatcttgtagtttctatattattggactttgatatacattgttctaaacaag 473

                                                                       
Query: 241 caaaattat-atttgtaaaaatctgagactccccatgtgaattcaggatttgttacatgc 299
           ||||||||| | | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caaaattataaatggaaaaaatctgagactccccatgtgaattcaggatttgttacatgc 413

                                                                       
Query: 300 aaagaactgagtagtcaaaagagcaacaagttatctcatttcttaatgccccgtctaaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaagaactgagtagtcaaaagagcaacaagttatctcatttcttaatgccccgtctaaag 353

                                                                       
Query: 360 ctttggaataggctattgactccaacttcctgaactgtttttctacttgaaaaatcaatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctttggaataggctattgactccaacttcctgaactgtttttctacttgaaaaatcaatg 293

                                                                       
Query: 420 tgagaaaaaatatagacatatatgtgaaaatacaattatgaaaacttattattgtatatc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgagaaaaaatatagacatatatgtgaaaatacaattatgaaaacttattattgtatatc 233

                                           
Query: 480 ttctcttaaaaattaatcataaacttcctatt 511
           ||||||||||||||||||||||||||||||||
Sbjct: 232 ttctcttaaaaattaatcataaacttcctatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space:   451902
Effective search space used:   451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)