Query= MSMg01no410_l20.b1 MSMg01no410_l20.b1 CHROMAT_FILE:
MSMg01no410_l20.b1 PHD_FILE: MSMg01no410_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:34 2005
(454 letters)
>mm_chr12_35966751_35967604
Length = 854
Score = 789 bits (408), Expect = 0.0
Identities = 408/408 (100%)
Strand = Plus / Minus
Query: 47 tttgactgaagaaaacaaaggaaagaggacattccacagaaaataatgaaaaattagact 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tttgactgaagaaaacaaaggaaagaggacattccacagaaaataatgaaaaattagact 795
Query: 107 ttgtagtaaatatttcatctgtgggtaatgctgtcttcattttgagacaaatacactcag 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ttgtagtaaatatttcatctgtgggtaatgctgtcttcattttgagacaaatacactcag 735
Query: 167 attcggaggagttaagcaatacttccataggctgtagctactaagtggttaagtctggga 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 attcggaggagttaagcaatacttccataggctgtagctactaagtggttaagtctggga 675
Query: 227 tttaaatcaaccattttagcaaattgatattgcttaggtcagcaaagaggattgcagtac 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttaaatcaaccattttagcaaattgatattgcttaggtcagcaaagaggattgcagtac 615
Query: 287 acaatatttttagagtacacatacccaattctctttgaaacattgtaaggaacagaattg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acaatatttttagagtacacatacccaattctctttgaaacattgtaaggaacagaattg 555
Query: 347 gtaaatgagaaaatagtttatctaactagggactgggtgaacaaaggacccagggatggt 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtaaatgagaaaatagtttatctaactagggactgggtgaacaaaggacccagggatggt 495
Query: 407 ggaaatatttatactcttgatcccaagtcagaatatacttaacagaat 454
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggaaatatttatactcttgatcccaagtcagaatatacttaacagaat 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_l20.g1 MSMg01no410_l20.g1 CHROMAT_FILE:
MSMg01no410_l20.g1 PHD_FILE: MSMg01no410_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:34 2005
(453 letters)
>mm_chr12_35782724_35783575
Length = 852
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 1 ttcttccattaataaatcaactcagtgatcctgattatattaatcaatatgtcatatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttccattaataaatcaactcagtgatcctgattatattaatcaatatgtcatatgga 260
Query: 61 tggtaagtaccttttaatattgtgacttgtatttgagtatttaaaatagttttttagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaagtaccttttaatattgtgacttgtatttgagtatttaaaatagttttttagcag 320
Query: 121 taaaaatattgtctgaagatcaaagtgattaatcaacagtatatgaaagaaatggaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaaatattgtctgaagatcaaagtgattaatcaacagtatatgaaagaaatggaataa 380
Query: 181 aaggaacgtgttaaattgtctctgcattttctggtacctttcttactattatggtgttgc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaacgtgttaaa-tgtctctgcattttctggtacctttcttactattatggtgttgc 439
Query: 241 tactgtctatcttaagtaatggcgtttactgcctgtgttgtctaggaatgattttaacaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tactatctatcttaagtaatggcgtttactgcctgtgttgtctaggaatgattttaacaa 499
Query: 301 tgctcctgtatgctacagattacctatctgaagtgtttaagacctgccttgctgtcctta 360
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 tgctcctatatgctacagattacctatctgaagtgtttaagacctgtcttgctgtcctta 559
Query: 361 aagtataaggcttatgcttttaatactctggtcttcaggcttcattttttttgtttagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtataaggcttatgcttttaatactctggtcttcaggcttcattttttttgtttagtt 619
Query: 421 aattgtgtaatatttaatatttcattttaatag 453
|||||||||||||||||||||||||||||||||
Sbjct: 620 aattgtgtaatatttaatatttcattttaatag 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
