NNNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTATCTTATGCAATAATAAATTACAAAGTGCTGCTTT
TAAGATGAAGTTAATGTATAATAAAACTGAAACCAAATTGGCACACACAA
AGGTATCCCATTGATTTTTGTGAGATCTTCTATTAACTGGCCATTATTGT
CATAGTATGTATAACTATCTGAATGTTTGCTGTCGTAAGAGTTACCAGGA
TCTGATCATGTTGCTTTATCTTGTACAGTGTGCTTTATGTGCTTCAAGCC
AAGAAATAATATAATATAGTTTTCTCCATTGCCACAGTGCTTTCATTTGA
AGATAAAATAATAGAAGTACAGGTATTACTTCTCTTCCTTTTTAACAACC
AGTTGGTATAAATAATTAATTCATTATATTTCTCATCTCCATTTCTTGAG
AATTAACTGGTTTTAGATTTTAATGCAAGAGGAATATTACTAGGCCAAGT
GTGCAAGTGTCATCCAAGGAAGGGTAGACTGCTGCAGACTCCTCTGAAGG
ACAAGTACTAGACAAAAAGAATGAAATAATGCTAGATAAAAAGGACACAG
ACAGAACAGGTAGTGTTTAGTCATCCTCAAAAGTTTCTTTACTATATTAA
TATTAGAGATACCTCACAGAGGATGCATATCAGAAGACCTACTAGGAAAT
CAGCCTCCTTATGAAGCATGTTTTTTAAATTAATTCCTCATCC

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACACACAAGAAAGCTA
AGTGAACTTTCTTAGACAAATTGAATGTTTAGGAAAAGAATTGGACCTCT
TTTGTGTCCCAGAAGGTATAGCCAAAATNTTTTGCCAACAAGAACAGCNC
CCTGGGNNAGGAGAATCTCTCTCTAGGGTTTATTATACGAAGGGGGGGGG
GAAAAGTGTTTACCAAGAAATGCGTGAAGTCCTGTACCTTTCTGCTGAGC
CTANGGCAAACGGGAAAAAGGGCACATGAATTCCCCTTTTCTGGTTACAA
TTTGGGTTAAAAGGGCCTTTCTTTTTGGCATTACCCCCCTAAAAAGGAAA
AATTCTTGGAAAATACTTTTTTTTTGGGGAATAGATTAAATATTTTATTT
AAAATCTCCCTATATAAAATAATAAAAAGGGGGGATTCTTTAAAAATTTT
TTATTTTTAAAAAAAAATTTTTTCCCTCCCCCTCTTGGGGTTTTGGGGAA
AAAAACCACGGGGTTTTTTTTAAAAAATGAGGGGCCCTGGAAAAAAGGGT
GTGGTGTTTTGGGTTGGTCCCCCCCGTGGTACCTTTATCCACCCGGGCGG
GGGCCACAAAAAAAAAATAAAAAAAAATTCCTCCCCTCGTCTTTCCTTTT
ACTCTTCCCCTCTCCTTTCACTCCTCTTCCCCCTCTTTACCCTTCTTCTC
CTTTTCCATCCCTTTCCCCTCCTATCTTATCTCCTCCCCCTTTCCCCTCC
CTTTTTTCCCCCTTCCTCTCCCGTTTAGGTGGGTGGGGGGGGGGGCGG

Query= MSMg01no410_n03.b1 MSMg01no410_n03.b1 CHROMAT_FILE:
MSMg01no410_n03.b1 PHD_FILE: MSMg01no410_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:40 2005
         (602 letters)



>mm_chr12_62597516_62598517
          Length = 1002

 Score = 1081 bits (559), Expect = 0.0
 Identities = 589/599 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcctatcttatgcaataataaattacaaagtgctgcttttaagatgaagttaatg 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggaattcctatcttatgtaataataaattacaaagtgctgcttttaagatgaagttaatg 743

                                                                       
Query: 64  tataataaaactgaaaccaaattggcacacacaaaggtatcccattgatttttgtgagat 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 742 tataataaaactgaaaccaaattggcacacacaaaggtatcccattgatttttgtgaggt 683

                                                                       
Query: 124 cttctattaactggccattattgtcatagtatgtataactatctgaatgtttgctgtcgt 183
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 682 cttctattaactggccattattgtcatagtatgtgtagctatctgaatgtttgctgtcgt 623

                                                                       
Query: 184 aagagttaccaggatctgatcatgttgctttatcttgtacagtgtgctttatgtgcttca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aagagttaccaggatctgatcatgttgctttatcttgtacagtgtgctttatgtgcttca 563

                                                                       
Query: 244 agccaagaaataatataatatagttttctccattgccacagtgctttcatttgaagataa 303
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 562 agccaagaaataatataatatagttttccccattgccacagtgctttcatttgaagataa 503

                                                                       
Query: 304 aataatagaagtacaggtattacttctcttcctttttaacaaccagttggtataaataat 363
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aataatagaagtacaggcattacttctcttcctttttaacaaccagttggtataaataat 443

                                                                       
Query: 364 taattcattatatttctcatctccatttcttgagaattaactggttttagattttaatgc 423
           ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 taatttattatatttctcatctccgtttcttgagaattaactggttttagattttaatgc 383

                                                                       
Query: 424 aagaggaatattactaggccaagtgtgcaagtgtcatccaaggaagggtagactgctgca 483
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 aagagaaatattactaggccaagtgtgcaagtatcatccaaggaagggtagactgctgca 323

                                                                       
Query: 484 gactcctctgaaggacaagtactagacaaaaagaatgaaataatgctagataaaaaggac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gactcctctgaaggacaagtactagacaaaaagaatgaaataatgctagataaaaaggac 263

                                                                      
Query: 544 acagacagaacaggtagtgtttagtcatcctcaaaagtttctttactatattaatatta 602
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acagacagaacaggtagtgtttagtcatcctcaaaagtttctttactatattaatatta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)