Query= MSMg01no412_k02.b1 MSMg01no412_k02.b1 CHROMAT_FILE:
MSMg01no412_k02.b1 PHD_FILE: MSMg01no412_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:04 2005
(549 letters)
>mm_chr12_32080854_32081802
Length = 949
Score = 1044 bits (540), Expect = 0.0
Identities = 545/548 (99%), Gaps = 3/548 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttgtgagctctcatagaagcttacaatgaaaatactttgggtagctacatta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttgtgagctctcatagaagcttacaatgaaaatactttgggtagctacatta 264
Query: 65 ctatatctttctcccaaggttgacactcttaagaattttaaaggattttaagacactgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatatctttctcccaaggttgacactcttaagaattttaaaggattttaagacactgag 324
Query: 125 tagagttcttcgtgccttcatctcttggactactcagccaataaagctagctgagctttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagagttcttcgtgccttcatctcttggactactcagccaataaagctagctgagctttc 384
Query: 185 acaatgcaacaccaacgaatcacctggttcctatgtagataaccacattcactggaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaatgcaacaccaacgaatcacctggttcctatgtagataaccacattcactggaaaaa 444
Query: 245 tatcagaggggcagctctaaaagccaaccacaagcatgggtagacagacgtgtgcattgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatcagaggggcagctctaaaagccaaccacaagcatgggtagacagacgtgtgcattgt 504
Query: 305 aatccatgcctctcatcctttgggtggaggacagagtgggcttatggcaatctctgtcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatccatgcctctcatcctttgggtggaggacagagtgggcttatggcaatctctgtcct 564
Query: 365 gtcaacacacagttcaatgaccctgggagaactcagctgatggcatatttatacagtcgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcaacacacagttcaatgaccctgggagaactcagctgatggcatatttatacagtcgc 624
Query: 425 agtttagtagacactgtcacagccacatgaccagagtctccctaccccgacctttttttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtttagtagacactgtcacagccacatgaccagagtctccctaccccgacctttttttt 684
Query: 485 ttt---ctttttctttctttctttttctgtcccaccagcataagagtcatcgtttcactt 541
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttttctttttctttctttctttttctgtcccaccagcataagagtcatcgtttcactt 744
Query: 542 tgaaacac 549
||||||||
Sbjct: 745 tgaaacac 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_k02.g1 MSMg01no412_k02.g1 CHROMAT_FILE:
MSMg01no412_k02.g1 PHD_FILE: MSMg01no412_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:04 2005
(241 letters)
>mm_chr12_32122939_32123580
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 acattgctagtgttccagacacatttttagcctattggtgaaaccattcaaaacattcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acattgctagtgttccagacacatttttagcctattggtgaaaccattcaaaacattcat 383
Query: 61 gcttataaactcaagattagaacagtaacttctaaataaaccatgttaagcagaaatatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 382 gcttataaactcaagattagaacagtaacttctaaataaaccatgttaagtagaaatatt 323
Query: 121 tttgataaataggaaatcagtttgagtacaatgattgataagttcagttcctaccttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tttgataaataggaaatcagtttgagtacaatgattgataagttcagttcctaccttaat 263
Query: 181 atattcagtgtggcgcttcagcaacagtgggaagg-tttttttttttttttttttgagat 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 atattcagtgtggcgcttcagcaacagtgggaaggttttttttttttttttttttgagat 203
Query: 240 aa 241
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
