Query= MSMg01no412_n15.b1 MSMg01no412_n15.b1 CHROMAT_FILE:
MSMg01no412_n15.b1 PHD_FILE: MSMg01no412_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:21 2005
(389 letters)
>mm_chr12_32345075_32345865
Length = 791
Score = 677 bits (350), Expect = 0.0
Identities = 380/391 (97%), Gaps = 2/391 (0%)
Strand = Plus / Plus
Query: 1 ttgcatccctgatgtgtgcctgtgatgtggggaanatgatagtttccccaca--tcagga 58
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 201 ttgcatccctgatgtgtgcctgtgatgtggggaaaatgatagtttccccacacatcagga 260
Query: 59 ctatggggattgatggagtcagtgcttggatttacatcagcacctggaacatagcacact 118
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 261 ctatggggattgatggagtcagtgcttggatttagatcagcacctggaacatagtacact 320
Query: 119 cttgtgagtgttatcacttgtgtcctgcgcagcctgctccagttcatcctcattgttctg 178
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgtgagtattatcacttgtgtcctgcgcagcctgctccagttcatcctcattgttctg 380
Query: 179 gaagcatctccggcgtttcctagtgcatagaaggtctcaaaacacgctaagtatggttat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcatctccggcgtttcctagtgcatagaaggtctcaaaacacgctaagtatggttat 440
Query: 239 aattgtttttttgcctgataactggtataacacagagttgatacgttttcctttattttt 298
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattgacgtgctgcctgataactggtataacacagagttgatacgttttcctttattttt 500
Query: 299 ttcctagactgttatagtgaatttttaaatgaagactttgatgtaaaaacttacacttcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcctagactgttatagtgaatttttaaatgaagactttgatgtaaaaacttacacttcc 560
Query: 359 caatctattcatcaagctgtaattgctgagc 389
|||||||||||||||||||||||||||||||
Sbjct: 561 caatctattcatcaagctgtaattgctgagc 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 791
Length adjustment: 9
Effective length of query: 380
Effective length of database: 782
Effective search space: 297160
Effective search space used: 297160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_n15.g1 MSMg01no412_n15.g1 CHROMAT_FILE:
MSMg01no412_n15.g1 PHD_FILE: MSMg01no412_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:21 2005
(471 letters)
>mm_chr12_32499934_32500804
Length = 871
Score = 580 bits (300), Expect = e-170
Identities = 303/304 (99%)
Strand = Plus / Minus
Query: 168 caagattgatttctgctctccacatctgcatgtacatatgtacaaacacatatctcacac 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 caagattgatttctgctctccacatctgcatgtacatatgtacaaacacatatctcacac 812
Query: 228 ataaacacacaaagtatttactagaaatggtgatgcatacctataatcacaacatgccaa 287
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ataaacacacaaagtatttacaagaaatggtgatgcatacctataatcacaacatgccaa 752
Query: 288 ggaggctgaggcaagaggatcccaagtttgaagccagtctgggtaagatatatagtaaga 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggaggctgaggcaagaggatcccaagtttgaagccagtctgggtaagatatatagtaaga 692
Query: 348 taatgaaacaaaaacaacaacgaaaatattttatggtgagtctctatgaatttttaaaaa 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 taatgaaacaaaaacaacaacgaaaatattttatggtgagtctctatgaatttttaaaaa 632
Query: 408 caataaccctgaatattaaagtttgtttcttattctgtaccaagacaaatgtagatttca 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 caataaccctgaatattaaagtttgtttcttattctgtaccaagacaaatgtagatttca 572
Query: 468 gtat 471
||||
Sbjct: 571 gtat 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
