MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-413J06
Chromosome	12 (Build37)
Map Location	119,640,902 - 119,641,081
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
Downstream gene	LOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rapgef5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217944 MGI:2444365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930023M06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77958 MGI:1925208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cdca7l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217946 MGI:2384982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13411 MGI:1100864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20688 MGI:107595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042993 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC668611 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	EG668615 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668615 MGI:3646450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC620665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 Proteins pseudo : _no_value

name	Sp8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320145 MGI:2443471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77706 MGI:1924956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 30 Proteins

name	Itgb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320910 MGI:1338035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627557 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627557 MGI:3648259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 673 ESTs, 5 Proteins

name	LOC100043011 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 81 ESTs pseudo : _no_value

name	Rapgef5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802209 GeneID:217944 MGI:2444365
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap guanine nucleotide exchange factor (GEF) 5 transcript_id : NM_175930.4

name	A930023M06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263575 GeneID:77958 MGI:1925208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA A930023M06 gene transcript_id : XM_001478569.1

name	Cdca7l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122528 GeneID:217946 MGI:2384982
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle associated 7 like transcript_id : NM_146040.1

name	Dnahc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753651 GeneID:13411 MGI:1100864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein, axonemal, heavy chain 11 transcript_id : NM_010060.1

name	Sp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887785 GeneID:20688 MGI:107595
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 4 transcript_id : NM_009239.2

name	LOC100042993 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263577 GeneID:100042993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042993 transcript_id : XM_001478615.1

name	Sp8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581568 GeneID:320145 MGI:2443471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 8 transcript_id : NM_177082.3

name	Abcb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263568 GeneID:77706 MGI:1924956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 30 Proteins product : ATP-binding cassette, sub-family B (MDR/TAP), member 5 transcript_id : XM_001002680.2

name	Itgb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249085 GeneID:320910 MGI:1338035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 8 transcript_id : NM_177290.3

name	EG627557 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393361 GeneID:627557 MGI:3648259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 673 ESTs, 5 Proteins product : predicted gene, EG627557, transcript variant 2 transcript_id : XM_925755.2

name	Rapgef5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60687514 GeneID:217944 MGI:2444365
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0030742 - GTP-dependent protein binding [Evidence ISS]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0017034 - Rap guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0005088 - Ras guanyl-nucleotide exchange factor activity [Evidence ISS] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence ISS]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Mras regulated guanine nucleotide exchange factor product : guanine nucleotide exchange factor for Rap1 protein_id : NP_787126.2

name	A930023M06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263576 GeneID:77958 MGI:1925208
definition	codon_start : 1 product : hypothetical protein LOC77958 protein_id : XP_001478619.1

name	Cdca7l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122529 GeneID:217946 MGI:2384982
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : transcription factor RAM2 protein_id : NP_666152.1

name	Dnahc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753652 GeneID:13411 MGI:1100864
definition	GO_component : GO:0005858 - axonemal dynein complex [Evidence IDA]; GO:0005929 - cilium [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IDA] GO_process : GO:0001539 - ciliary or flagellar motility [Evidence IDA]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation note : situs inversus viscerum; dynein, axon, heavy chain 11 product : dynein, axonemal, heavy chain 11 protein_id : NP_034190.1

name	Sp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887786 GeneID:20688 MGI:107595
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008016 - regulation of heart contraction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : trans-acting transcription factor 4 protein_id : NP_033265.2

name	LOC100042993 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263578 GeneID:100042993
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478665.1

name	Sp8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559864 CCDS:CCDS26213.1 GeneID:320145 MGI:2443471
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0009954 - proximal/distal pattern formation [Evidence IMP] codon_start : 1 product : trans-acting transcription factor 8 protein_id : NP_796056.2

name	Abcb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263569 GeneID:77706 MGI:1924956
definition	codon_start : 1 product : ATP-binding cassette, sub-family B (MDR/TAP), member 5 protein_id : XP_001002680.2

name	Itgb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249086 GeneID:320910 MGI:1338035
definition	GO_component : GO:0008305 - integrin complex [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001573 - ganglioside metabolism [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : integrin beta 8 protein_id : NP_796264.2

name	EG627557 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263579 GeneID:627557 MGI:3648259
definition	codon_start : 1 product : similar to Nuclear receptor coactivator 4 isoform 2 protein_id : XP_930848.3

name	LOC668611 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668611
definition	number : 1 pseudo : _no_value

name	EG668615 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668615
definition	number : 2 pseudo : _no_value

name	EG668615 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668615
definition	number : 1 pseudo : _no_value

name	LOC620665 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620665
definition	number : 3 pseudo : _no_value

name	LOC620665 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620665
definition	number : 2 pseudo : _no_value

name	LOC620665 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620665
definition	number : 1 pseudo : _no_value

name	LOC100043011 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263580 GeneID:100043011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 81 ESTs product : hypothetical protein LOC100043011 pseudo : _no_value transcript_id : XR_033832.1

clone name	MSMg01-471G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144C09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-144J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-413J06.T7 (MSMg01no413_j06.b1)	MSMg01-413J06.TJ (MSMg01no413_j06.g1)
ACC	AG510079	AG510080
length	730	747
length of high quality (start - end)	331 (39 - 369)	451 (69 - 519)
definition	CHROMAT_FILE: MSMg01no413_j06.b1 PHD_FILE: MSMg01no413_j06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:18 2005	CHROMAT_FILE: MSMg01no413_j06.g1 PHD_FILE: MSMg01no413_j06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:18 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGATCCGCGGAATTC ACAAAAGAATATCCAGAAATGGCCAATATATGGTTTTAAGAGTGCTCAAC ATCCTTAGCTATAAGGAAATGCAAGTTGAAATTGCTTTGAGATTCTGTTT CATCCATGCCAGATCCTGGAAAGGGTGTGTGAAGAAAAGCATCCTTCTTT ACTGCTGGGGTGTGCAGCCAGTATGGGAATCACTGTGGAGGTTTTGCAAA AGACTAAAAATATTACTACCATATGACCCAGCTTTACTACTCCTGGGCAT ATATTGCTGAAGGTCTCTGTATTGTAGGTTTTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTNNNTTTTTTTTTTTAAATTTTTTTTTTT TTTTNTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTT NNTTTTTTNTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTT TTTTTTTTNTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTCTCCTTNCTTTTTTTTTCCTTCCTAACTTC CCTTCCCTTTTTTCCTTTCTTTTCCCTTCTTTTCGTCCCCCCCCCGTTTT CCTGTTTTTCTCCTTTCCTTCTCCTTCCCCCTTCCTTTCTCCCTTCTCTT CTTATTTTTTTCTCCTCCTGCCTCTCTTTG	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXTTAAACCTCCTGCATCCGCTGCACCATGAGGA CAGGGATCAATAGGGGAACCATCACATCTAGCTCTGTCATTTACAATTTT GTCAGTATCATATAAAACTTCCATGGTGAGCCCTCTACTGGTGCTACTCA CAAGGGATCCAGTAACAGGGAAACACATTCTCTTTACAGTCTCCTAAACA ATCCTGATAAGTCTGCTTTGCATTTAAGCCAAATGAGTTAAAAAGAGATA TCTAACTCTTTTTAGCTTCTCTCTTTCCTTGTTAAGAGTCCATCTCTGTA TTCCAAATGTGTATCAACTCTAAGTAACCATAGACCCTCCCAGAAAAGTT ATGAAATAGAAGAAAACAGAGTGTCGGAGGAGAGGCTGCCAATCCCTGGC ATTACTGAGAAGATTCGTGTTCAAGACAGGAAGGAGTTTGATACTGTATG ATAGGTGAGTGACTTGGCCTGGTTGTGTGCCCCAGGGAATGTGATGACCT CCAAGGAGTAAAGCTGTCTTGGTGCTCTTGGTGAAGCTAGCCCCTGAGAC CACACCTCTTTGGTCACTCCCCCTGTGCAGCATTATTCTCCCTGCCTCAC CATACAATAGTTGCTAAAATATTTTCCCCGAAAATCCACCCCCTGTGATT GAAATATTAACACCCCTTTTTTTGGTGTTGGCCAAATTCTCACTGTC
quality values	Open. Hide. 28 33 37 37 33 32 32 28 27 30 32 30 26 25 32 37 37 37 43 30 28 28 28 28 30 27 23 11 9 9 12 12 11 11 19 17 21 18 16 16 26 30 48 53 38 38 38 36 36 33 33 33 33 33 30 33 23 13 9 8 8 8 8 8 23 25 37 37 37 37 37 41 41 53 53 53 53 59 57 57 53 53 53 53 53 53 53 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 50 50 50 47 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 41 41 34 34 28 23 21 15 10 10 12 14 25 32 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 46 46 46 59 59 59 57 57 47 47 37 35 35 28 28 32 28 15 11 8 8 8 3 0 0 0 3 8 8 7 7 9 9 10 8 8 6 6 6 6 6 8 7 7 8 8 8 8 8 9 9 9 10 10 3 0 3 7 6 6 6 6 6 6 3 0 0 0 3 6 6 6 7 8 10 11 24 18 18 24 23 23 22 15 11 15 8 8 3 0 3 6 6 6 6 8 10 12 9 10 3 0 0 3 8 8 11 11 3 0 3 9 6 8 6 7 8 8 3 0 3 8 11 11 8 8 8 8 8 13 9 9 9 15 10 9 6 6 7 7 7 8 7 9 9 9 12 3 0 3 9 9 9 8 7 8 7 6 3 0 3 6 8 8 13 11 15 10 11 14 15 15 9 7 7 3 0 3 9 9 9 9 10 10 10 12 12 9 9 9 8 8 8 6 6 7 7 6 8 12 10 10 10 11 13 12 14 14 22 20 22 14 19 10 10 9 9 10 12 10 12 12 10 12 8 8 3 0 3 8 11 10 9 9 13 10 11 16 15 11 11 12 15 8 6 6 6 6 8 15 18 13 12 8 8 8 8 8 10 12 19 24 14 13 10 9 12 12 14 12 12 12 14 14 19 13 8 8 8 8 10 12 8 8 8 6 8 10 8 8 8 8 8 10 18 11 11 12 10 10 10 13 8 7 9 9 19 18 15 11 8 8 8 10 18 18 12 11 8 8 8 8 8 8 13 15 15 12 8 8 9 10 10 6 8 6 6 13 15 10 10 8 8 10 10 10 8 10 10 10 8 8 8 11 12 10 10 8 10 11 8 10 10 8 8 7 6 8 8 6 7 7 10 8 8 6 6 6 7 8 6	Open. Hide. 9 9 16 16 10 10 12 16 19 43 39 39 37 37 37 37 39 39 39 44 59 44 33 27 11 9 9 11 13 9 9 9 10 10 21 15 28 21 31 37 37 47 47 47 47 53 53 57 53 53 50 41 41 26 13 17 10 12 11 9 11 11 11 21 21 33 33 33 39 44 43 50 59 57 57 57 57 59 53 53 53 53 53 53 57 59 59 57 57 68 68 68 68 47 51 51 68 68 43 68 68 68 47 47 47 48 48 48 68 68 54 59 59 57 57 57 57 57 68 68 57 57 57 57 57 57 57 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 57 59 59 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 59 57 68 68 68 57 57 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 57 57 59 59 68 68 68 68 68 68 68 59 59 59 57 57 57 68 68 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 57 54 54 57 59 59 59 59 57 57 57 57 57 57 57 57 57 59 59 59 54 48 48 48 48 48 57 57 57 59 57 54 54 57 57 57 57 57 57 43 43 25 25 23 27 19 20 26 26 36 33 39 43 39 39 37 37 37 37 30 31 31 37 34 39 31 25 25 32 37 37 37 37 37 40 43 43 33 28 28 28 25 24 30 28 28 16 19 16 23 23 25 33 36 39 39 37 37 30 24 23 25 18 24 19 17 15 9 9 9 12 17 16 26 26 30 27 24 19 19 19 21 17 21 15 14 11 12 12 14 19 21 37 26 25 14 14 14 17 17 28 28 24 23 13 11 11 16 18 12 18 12 14 12 12 13 13 10 14 14 9 9 8 11 8 8 8 10 8 8 8 8 8 8 8 10 8 9 9 10 10 10 9 12 11 16 12 11 10 12 13 18 16 22 21 19 18 16 10 10 10 10 10 10 11 10 12 8 8 8 8 10 8 9 9 9 8 10 6 6 6 10 12 9 9 8 11 10 11 11 13 13 9 8 8 8 8 9 9 8 8 8 8 8 8 8 10 10 12 12 10 7 7 6 6 8 8 8 8 8 8 8 11 12 15 10 9 9 10 11 10 10 19 12 12 9 8 8 8 8 8 8 8 8 8 9 9 9 9 9 11 12 10 9 10 9 8 8 8 8 8 8 10 10 8 8 8 8 6 6 6 6 6 6 8 8 8 8 9 9 9 9 8 10 10 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no413_j06.g1 MSMg01no413_j06.g1 CHROMAT_FILE:
MSMg01no413_j06.g1 PHD_FILE: MSMg01no413_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:18 2005
         (451 letters)



>mm_chr12_119640702_119641552
          Length = 851

 Score =  325 bits (168), Expect = 4e-93
 Identities = 177/180 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaaacctcctgcatccgctgcaccatgaggacagggatcaataggggaaccatcacatc 60
           |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 ttaaacctcctgcatcggctgcaccatgaggactgggatcaataggggaaccatcacatc 321

                                                                       
Query: 61  tagctctgtcatttacaattttgtcagtatcatataaaacttccatggtgagccctctac 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 320 tagctctgtcatttacaattttgtcaatatcatataaaacttccatggtgagccctctac 261

                                                                       
Query: 121 tggtgctactcacaagggatccagtaacagggaaacacattctctttacagtctcctaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggtgctactcacaagggatccagtaacagggaaacacattctctttacagtctcctaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information