Query= MSMg01no413_o14.b1 MSMg01no413_o14.b1 CHROMAT_FILE:
MSMg01no413_o14.b1 PHD_FILE: MSMg01no413_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:45 2005
(610 letters)
>mm_chr12_10370773_10371782
Length = 1010
Score = 1141 bits (590), Expect = 0.0
Identities = 602/606 (99%)
Strand = Plus / Plus
Query: 5 gaattctttctatttaccgaatgatcatcattgatttcaacctaaacattttttaagtag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttctatttactgaatgatcatcattgatttcaacctaaacattttttaagtag 264
Query: 65 ttccctactttaaaagctcataaaggtaaagtcaattgaagaagtatgtggtaacatctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttccctactttaaaagctcataaaggtaaagtcaattgaagaagtatgtggtaacatctt 324
Query: 125 gtaacagtgtacaacaataccacagtcagaatattgacattgatagaatcaaggtaccaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaacagtgtacaacaataccacagtcagaatattgacattgatagaatcaaggtaccaa 384
Query: 185 aaccattcttctttgttacttgattatagctacatccacttgccctgcctcacttttgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaccattcttctttgttacttgattatagctacatccacttgccctgcctcacttttgaa 444
Query: 245 tcctagcaactacaagtctggtctccatttctactttgtgtcatgtcaagaatggtactc 304
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 tcctagcaactacaagtctggtctccatttctactaggtgtcatgtcaagaatggtactc 504
Query: 305 aaatgtaatcacacagtctattacttttaatgatttattttgtctctagaaagtcatcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatgtaatcacacagtctattacttttaatgatttattttgtctctagaaagtcatcca 564
Query: 365 ggttactggctgtattgatggtttgctctttcaactgttatctagtattctgtgcataaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggttactggctgtattgatggtttgctctttcaactgttatctagtattctgtgcataaa 624
Query: 425 tatgtcatagttaaactattaattagcatataacaatcatattttataggctccccaggt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgtcatagttaaactattaattagcatataacaatcatattttataggctccccaggt 684
Query: 485 taactctgatgccttctctagtatgataatgactagtctctggatagcttgcttagaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taactctgatgccttctctagtatgataatgactagtctctggatagcttgcttagaaaa 744
Query: 545 gtaagtgagaagcaaaaacatagctaagtgtggtagaagaggcagttactagaggaccat 604
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 745 gtaagtgagaagcaaaaacatagctaagtgtggtagaagaggcagttacaagaggaccat 804
Query: 605 gagatc 610
||||||
Sbjct: 805 gagatc 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_o14.g1 MSMg01no413_o14.g1 CHROMAT_FILE:
MSMg01no413_o14.g1 PHD_FILE: MSMg01no413_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:45 2005
(542 letters)
>mm_chr12_10549528_10550469
Length = 942
Score = 942 bits (487), Expect = 0.0
Identities = 529/543 (97%), Gaps = 2/543 (0%)
Strand = Plus / Minus
Query: 1 gaatctattgagacaaaaagacatggggattaatcagtatctttggttcagagtggtgag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaatctattgagacagaaagacatggggattaatcagtatctttggttcagagtggtgag 683
Query: 61 tactaacaaggcattcagcattaattttaagaatgaggtgacaggtgtagtgtaagtaac 120
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 682 tactaacaaggcacgcagcattaattttaagaatgaggtgacaggtgtggtgtaagtaac 623
Query: 121 tcagtgcagtgctacagaacgtgccaatccaccaattcatgggcctacaattattcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcagtgcagtgctacagaacgtgccaatccaccaattcatgggcctacaattattcataa 563
Query: 181 aaccattatagtttaagaaaaacaggagagattgattgaatcaaaatgagtcacaactat 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaccatcatagtttaagaaaaacaggagagattgattgaatcaaaatgagtcacaactat 503
Query: 241 caccattatcttatcataaaaatacatctgaagttacaaaatattactaatgactggtta 300
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 502 caccattatcttaacataaaaatacacctgaagttacaaaatattactaatgactggtta 443
Query: 301 gtgagatatatgaactcacacaacattatcaatctgcccctgaagtcatcctcaacaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgagatatatgaactcacacaacattatcaatctgcccctgaagtcatcctcaacaact 383
Query: 361 catcattgcacatgttcacattttacccattcttaaagatcaggaccaggtttgcctctt 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 382 catcattgcacatgttcacatcttacccattcttaaagatcaggaccaggtttccctctt 323
Query: 421 agaaactatctccaaaccacctgtttctcttgggatattccactctagattcattcaacc 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 322 agaaactatctccaaaccacctgtttctcttgggatattctactctagattcattcaacc 263
Query: 481 atccaaaaacataagcattt-tgaactcatcccttgggatatctttggcccctgtgcgag 539
|| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 262 atgcaaaaacataagcatttct-aactcatcccttgggatatctttggcccctgtacgag 204
Query: 540 ggc 542
|||
Sbjct: 203 ggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
