ACTCCTATAGTTCGAGGATCCGCGGAATTCAGTATTTTTTGCCTATGATT
GATAAGAATTCAGTATTTCTTATTTTGTTAATCTTAAGGGATGGTATGTA
CATGCAATTATTCAACAATGCTATTCACTTCTTAGGAATGAATTCTCCAA
TATCTTGAAAGGCACTGTAAGATTAGTAATTAAAAAAAAACCCACCAAAA
TAATCTTAATTAATTGAATCTGAATTCTGTCATGATAAAAGATTAAAATA
CTGTTGGAATATAGTTTCCATTATTTTTACTATACAACTGTACATACTCA
TTGAATATTTAATTTATATATTTTGATAACCCACAATGCATCCATTTGGA
TCTTACTTTGAACTGTCAAACTCCTGCCTTTCATAATATTAAACACAAGT
TTGCATTTATCTCTAAAGTGTTAATGAAACATTTTAGTCATCTTAGCTCA
AAGAAAGATTTTGTACAATTGTGTTACTCTTTTAATGTTGCTATTTGACA
TAGCAAAATAATGTAAATATGCTCTAGTGTGATCATAGTTCAACAGAGCA
TATCTTTTTGCCTCAAGTATAAGTTAGTAGTCCTCTTAAAAATAGAGCTA
GTATGTAATAACACTGACAGAAAGGAAAAGTAAATTTATGAAGAAATTTA
TTGGTCTTTAAAAATTAATTTTTTTTCTACGGGCCTTTAAAAAAACCACG
AAAATGATACCTTCCCCGTAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCTGTTCCTCA
GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAAGTAACACATTCCCAAA
GAAACTCACACAATAGGTATTCCCTGTATAAGTGGATATTAACCCCCAAC
CCTAGGATACCCAAGATATAAGATATTCTTTTGTTAAACACTTGAAACTC
TCCAAAAAATGAAAACTGGACTGTGGACACTTATCCCCC

Query= MSMg01no416_j22.b1 MSMg01no416_j22.b1 CHROMAT_FILE:
MSMg01no416_j22.b1 PHD_FILE: MSMg01no416_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:17 2005
         (490 letters)



>mm_chr12_43497987_43498875
          Length = 889

 Score =  917 bits (474), Expect = 0.0
 Identities = 486/490 (99%), Gaps = 1/490 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgataagaattcagtatttcttattttgttaatcttaagggatggtatgtacatgcaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgataagaattcagtatttcttattttgttaatcttaagggatggtatgtacatgcaatt 260

                                                                       
Query: 61  attcaacaatgctattcacttcttaggaatgaattctccaatatcttgaaaggcactgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaacaatgctattcacttcttaggaatgaattctccaatatcttgaaaggcactgta 320

                                                                       
Query: 121 agattagtaattaaaaaaaaacccaccaaaataatcttaattaattgaatctgaattctg 180
           |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 agattagtaa-taaaaaaaaaaccaccaaaataatcttaattaattgaagctgaattctg 379

                                                                       
Query: 181 tcatgataaaagattaaaatactgttggaatatagtttccattatttttactatacaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcatgataaaagattaaaatactgttggaatatagtttccattatttttactatacaact 439

                                                                       
Query: 241 gtacatactcattgaatatttaatttatatattttgataacccacaatgcatccatttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtacatactcattgaatatttaatttatatattttgataacccacaatgcatccatttgg 499

                                                                       
Query: 301 atcttactttgaactgtcaaactcctgcctttcataatattaaacacaagtttgcattta 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attttactttgaactgtcaaactcctgcctttcataatattaaacacaagtttgcattta 559

                                                                       
Query: 361 tctctaaagtgttaatgaaacattttagtcatcttagctcaaagaaagattttgtacaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctctaaagtgttaatgaaacattttagtcatcttagctcaaagaaagattttgtacaat 619

                                                                       
Query: 421 tgtgttactcttttaatgttgctatttgacatagcaaaataatgtaaatatgctctagtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtgttactcttttaatgttgctatttgacatagcaaaataatgtaaatatgctctagtg 679

                     
Query: 481 tgatcatagt 490
           ||||||||||
Sbjct: 680 tgatcatagt 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space:   421920
Effective search space used:   421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)