Query= MSMg01no417_g14.b1 MSMg01no417_g14.b1 CHROMAT_FILE:
MSMg01no417_g14.b1 PHD_FILE: MSMg01no417_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:17 2005
(649 letters)
>mm_chr12_4541186_4542234
Length = 1049
Score = 1203 bits (622), Expect = 0.0
Identities = 640/646 (99%)
Strand = Plus / Plus
Query: 4 ggaattcattctcttccctattttgccatgaacaatgaccataaagacccctttgcaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattctcttccctattttgccatgaacaatgaccataaagacccctttgcaaca 263
Query: 64 tacagatcttttcctcataaaacagagaaaccacagaacagcagtaaccactctgagcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacagatcttttcctcataaaacagagaaaccacagaacagcagtaaccactctgagcaa 323
Query: 124 agtcaaaaggccagtgacaaaatatttgcaattcatatcacaaatggctgatgtcctgat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtcaaaaggccagtgacaaaatatttgcaattcatatcacaaatggctgatgtcctgat 383
Query: 184 ataaaaatatcctgcaaatcaataaggtaatgaccaaaattaccccatagagaaataggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataaaaatatcctgcaaatcaataaggtaatgaccaaaattaccccatagagaaataggc 443
Query: 244 caacagagaaacagtttatggaaggaaaactgaaggaaaatactaagacaagcaactcct 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 caacagagaaacagtttatggaaggaaaacagaaggaaaatactaagacaagcaactcct 503
Query: 304 taacatatgcaaaggaaaaaaaatgtggttttcaaatactatgctgacattccattttat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taacatatgcaaaggaaaaaaaatgtggttttcaaatactatgctgacattccattttat 563
Query: 364 aacatcttagaatgctacagaccaaaatgtaggccaaaccatggtgctggcaagagctgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 564 aacatcttagaatgctacagaccaaaatgtaggccaaaccatggtgctggcaagaactgg 623
Query: 424 gagatgggtgtatttattggtgaaagtatacattggagcctctaaaggacaagttacaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagatgggtgtatttattggtgaaagtatacattggagcctctaaaggacaagttacaat 683
Query: 484 tatacagactcttagctggcatcccagtgctgggagttcagtctataggcacacttaaac 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 684 tatacagactcttagctggcatcccagtgctgggagttcagtttataggcacacttaaac 743
Query: 544 atacatgaactgaactgtggacaactgcagcatttttgtgagagcaaaataagcactcac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atacatgaactgaactgtggacaactgcagcatttttgtgagagcaaaataagcactcac 803
Query: 604 ttgtcatccgaaagtaaagagaaaaggaaatcgtatcttgaccaaa 649
|||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 804 ttgtcatctgaacgtaaatagaaaaggaaatcgtatcttgaccaaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_g14.g1 MSMg01no417_g14.g1 CHROMAT_FILE:
MSMg01no417_g14.g1 PHD_FILE: MSMg01no417_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:17 2005
(480 letters)
>mm_chr12_4665383_4666262
Length = 880
Score = 893 bits (462), Expect = 0.0
Identities = 474/478 (99%)
Strand = Plus / Minus
Query: 3 cacaccattccttgaccaacctgacttcactctttcctcaacattgtgcagacaagactc 62
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 680 cacaccattccttgaccaacctgacttcactctttcctcaacattgtgcaaacaagtctc 621
Query: 63 tctgcagacacctctaactcaggtgcccagtgatctccctcctcttactctttcactaag 122
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttgcggacacctctaactcaggtgcccagtgatctccctcctcttactctttcactaag 561
Query: 123 gacttctgggtatggtgaagcctggcttctgttgagggcccaaagcaaatgacctgctcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gacttctgggtatggtgaagcctggcttctgttgagggcccaaagcaaatgacctgctcc 501
Query: 183 tcctagagcacactccaatttcacagaatggccaagatgccctcccctccatatgccctc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcctagagcacactccaatttcacagaatggccaagatgccctcccctccatatgccctc 441
Query: 243 agaacagtgcagatgtatttattgaatttctcagacctcacagttacatgcatgtatgat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaacagtgcagatgtatttattgaatttctcagacctcacagttacatgcatgtatgat 381
Query: 303 tcctttagcaggttataaactgcttaatgacagagttttttaaacaaatgtttgtcttga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctttagcaggttataaactgcttaatgacagagttttttaaacaaatgtttgtcttga 321
Query: 363 cttttagcacataataaaatactggaaaatacatttctggttttactgtgatgaagtctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttttagcacataataaaatactggaaaatacatttctggttttactgtgatgaagtctg 261
Query: 423 ccacttctttttagtagcattaatgtatctaaccacatattccaagtaccaaggttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccacttctttttagtagcattaatgtatctaaccacatattccaagtaccaaggttcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
